RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SPOPLQ6IQ16 392 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 UGT2A3Q6UWM9 527 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CEP97Q8IW35 865 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 FBXO39Q8N4B4 442 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 OR1J2Q8NGS2 313 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 SPPL2BQ8TCT7 592 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 NEUROG1Q92886 237 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MIB2Q96AX9 1013 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 OTUB2Q96DC9 234 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CFAP36Q96G28 342 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 DUS3LQ96G46 650 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM68Q96MH6 324 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PRICKLE1Q96MT3 831 aaPredicted RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 BIRC8Q96P09 236 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PPP1R2P1Q96PQ5 205 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PPIL3Q9H2H8 161 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 UTP6Q9NYH9 597 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM5Q9Y2B1 443 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 KLHL20Q9Y2M5 609 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 RGSL1A5PLK6 1076 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CASTOR2A6NHX0 329 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 GOLGA8RI6L899 631 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PTGESO14684 152 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 KCNN4O15554 427 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PSMD3O43242 534 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 RSL1D1O76021 490 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CLPTM1O96005 669 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 UBTFL6P0CB48 400 aaPredicted RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MCF2P10911 925 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 FGF3P11487 239 aaPredicted RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 ARL1P40616 181 aaPredicted RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MATKP42679 507 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 KPNA2P52292 529 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 AIF1P55008 147 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 KDSRQ06136 332 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MYBPHQ13203 477 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 DPYSL2Q16555 572 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 AWAT2Q6E213 333 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 RPUSD3Q6P087 351 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 EPGNQ6UW88 154 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 LCLAT1Q6UWP7 414 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF575Q86XF7 245 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF595Q8IYB9 648 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 DCP1BQ8IZD4 617 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CMTM8Q8IZV2 173 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PGAM4Q8N0Y7 254 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PACRGLQ8N7B6 248 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 OR5B17Q8NGF7 314 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 RPLP0P6Q8NHW5 317 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 BBS10Q8TAM1 723 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PDCD6IPQ8WUM4 868 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 SLC38A5Q8WUX1 472 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 SNRNP27Q8WVK2 155 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MED8Q96G25 268 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 HNRNPABQ99729 332 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 CALN1Q9BXU9 219 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 MINDY3Q9H8M7 445 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 TXNDC16Q9P2K2 825 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 GIMAP2Q9UG22 337 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PTBP2Q9UKA9 531 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 POMPQ9Y244 141 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 PTPRJQ12913 1337 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 KIAA1549LQ6ZVL6 1849 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 TNRC6BQ9UPQ9 1833 aaKnown RBP3.94□□□□□ -1.78
LINC00561-201ENST00000565815 NUP205Q92621 2012 aa3.94□□□□□ -1.78
LINC00561-201ENST00000565815 C15orf38-AP3S2A0A0A6YYH1 394 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 IGHV4-28A0A0C4DH34 117 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRABD2BA6NFA1 517 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TTC36A6NLP5 189 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PLK4O00444 970 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RNASEH1O60930 286 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 JRKO75564 520 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SEC24AO95486 1093 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 FAM58BPP0C7Q3 252 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RALBP11234 206 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 COX4I1P13073 169 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TCF4P15884 667 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SDC4P31431 198 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 SERPINB6P35237 376 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 CCR2P41597 374 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ACADSBP45954 432 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RIPPLY3P57055 190 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 RPL10AP62906 217 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DYNLT1P63172 113 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 FOLH1Q04609 750 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRAP1Q12931 704 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 APOFQ13790 326 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TRIP10Q15642 601 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TXNRD3NBQ6F5E7 133 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DHRS4L2Q6PKH6 230 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PACS1Q6VY07 963 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 ARPINQ7Z6K5 226 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 DNAJB7Q7Z6W7 309 aaPredicted RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 PATL1Q86TB9 770 aaKnown RBP3.93□□□□□ -1.78
LINC00561-201ENST00000565815 METTL23Q86XA0 190 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 TICAM1Q8IUC6 712 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 NUP93Q8N1F7 819 aa3.93□□□□□ -1.78
LINC00561-201ENST00000565815 THEM5Q8N1Q8 247 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms