RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 MRGPRX1Q96LB2 322 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CCDC3Q9BQI4 270 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 YIPF4Q9BSR8 244 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ACTRT3Q9BYD9 372 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 RACGAP1Q9H0H5 632 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 C11orf16Q9NQ32 467 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CLEC1BQ9P126 229 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PCOLCE2Q9UKZ9 415 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CLCA2Q9UQC9 943 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 RPL36Q9Y3U8 105 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 BRCA2P51587 3418 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 hCG_2014768A0A024R1R8 64 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 FAM221BA6H8Z2 402 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 OR6C74A6NCV1 312 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PRR19A6NJB7 356 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PRAMEF26H0Y7S4 382 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 AXIN1O15169 862 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 SEMA4FO95754 770 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 HMGN2P05204 90 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 RPLP0P05388 317 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CHMP24386 653 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ELAVL4P26378 380 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PEBP1P30086 187 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 LSM3P62310 102 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TNFRSF17Q02223 184 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ST3GAL4Q11206 333 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZNF425Q6IV72 752 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 Q6ZPB1 254 aaPredicted RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TSEN54Q7Z6J9 526 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 AMER3Q8N944 861 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZCCHC10Q8TBK6 192 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 FNDC8Q8TC99 324 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZNF675Q8TD23 568 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 HMGB4Q8WW32 186 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 COL26A1Q96A83 441 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 MSANTD3Q96H12 275 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ARMC7Q9H6L4 198 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 KCNK12Q9HB15 430 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TRPV5Q9NQA5 729 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TRNAU1APQ9NX07 287 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CHCHD3Q9NX63 227 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ACTR10Q9NZ32 417 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CD207Q9UJ71 328 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ALPK3Q96L96 1907 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 KIF26AQ9ULI4 1882 aaPredicted RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZAR1LA6NP61 321 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 AP3D1O14617 1153 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PGRMC2O15173 223 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 HSMCR30P0CW71 290 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CTSEP14091 401 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 UGT2B7P16662 529 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CNR2P34972 360 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 SOX6P35712 828 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TPMTP51580 245 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 NUDT6P53370 316 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 LIM2P55344 173 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ILKQ13418 452 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 C1DQ13901 141 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 LARS2Q15031 903 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 RGS21Q2M5E4 152 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 EIPR1Q53HC9 387 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 MEDAGQ5VYS4 303 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 C18orf63Q68DL7 685 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 FRMPD2BQ6IN97 320 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 FIGLAQ6QHK4 219 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 SLC16A12Q6ZSM3 486 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 Q6ZSR6 202 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 OR9A2Q8NGT5 310 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TEX47Q8TBZ9 253 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 GNPDA2Q8TDQ7 276 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 EZH1Q92800 747 aaPredicted RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 UBE2FQ969M7 185 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 FKBP10Q96AY3 582 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PPP1R14BQ96C90 147 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PLEKHA8Q96JA3 519 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PRRC1Q96M27 445 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 MS4A4EQ96PG1 132 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TRNT1Q96Q11 434 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 OR7D2Q96RA2 312 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 TMEM168Q9H0V1 697 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PRDM9Q9NQV7 894 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 GPR83Q9NYM4 423 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZNF226Q9NYT6 803 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 APOBEC3BQ9UH17 382 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ERGIC3Q9Y282 383 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 IFT52Q9Y366 437 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 SNX11Q9Y5W9 270 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 A0A0J9YVX5 310 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 A0A1W2PRQ8 180 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 KPNA4O00629 521 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 ZSCAN9O15535 394 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 CBFA2T3O75081 653 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 PRKRAO75569 313 aaKnown RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 GLULP15104 373 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 NUDT1P36639 197 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-201ENST00000565113 MC3RP41968 323 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms