RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 XKRXQ6PP77 449 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 TAGAPQ8N103 731 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 C4orf33Q8N1A6 199 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 VWA5B2Q8N398 1253 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 FBXW8Q8N3Y1 598 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 FAM109AQ8N4B1 249 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 GBP7Q8N8V2 638 aaPredicted RBP18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 ADCY4Q8NFM4 1077 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 OR2W6PQ8NHA6 318 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 CCDC126Q96EE4 140 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 CNRIP1Q96F85 164 aaPredicted RBP18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 VKORC1Q9BQB6 163 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 EBPLQ9BY08 206 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 PROK2Q9HC23 129 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 MAT2BQ9NZL9 334 aa18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.39■□□□□ 0.53
SHCBP1-203ENST00000564272 TEX15Q9BXT5 2789 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 DNAJC13O75165 2243 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ATP6AP2A0A1C7CYW4 349 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 COPEO14579 308 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ATP6AP2O75787 350 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ATP1B1P05026 303 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 IL3P08700 152 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CSNK2A2P19784 350 aaPredicted RBP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 GPX3P22352 226 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CRHR1P34998 444 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 NAGLUP54802 743 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 FBXW4P57775 412 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 VSNL1P62760 191 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 KCNJ2P63252 427 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 BTKQ06187 659 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ACSM2AQ08AH3 577 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 MGAT2Q10469 447 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 DUSP8Q13202 625 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 EXOSC7Q15024 291 aaKnown RBP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 NNATQ16517 81 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 NTRK2Q16620 822 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 PRICKLE4Q2TBC4 344 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CCDC153Q494R4 210 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 SPIN4Q56A73 249 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ACSM2BQ68CK6 577 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 FRMD7Q6ZUT3 714 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 DND1Q8IYX4 353 aaKnown RBP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 SLC34A3Q8N130 599 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 MARVELD2Q8N4S9 558 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CCDC63Q8NA47 563 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 SIMC1Q8NDZ2 872 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 OR7G1Q8NGA0 311 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 PHF10Q8WUB8 498 aaKnown RBP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ADIPOR1Q96A54 375 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 TP53INP1Q96A56 240 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 MARVELD3Q96A59 401 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 UTS2RQ9UKP6 389 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CNOT11Q9UKZ1 510 aaKnown RBP18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 DLGAP4Q9Y2H0 992 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 CELSR2Q9HCU4 2923 aa18.38■□□□□ 0.53
SHCBP1-203ENST00000564272 ITPR2Q14571 2701 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 GNG14A0A1W2PPG7 69 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 CCDC151A5D8V7 595 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 LRRC3CA6NJW4 275 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 CDH16O75309 829 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 KRT4P19013 534 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 AGAP20933 346 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 TIA1P31483 386 aaKnown RBP eCLIP18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 SOX18P35713 384 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 CCT5P48643 541 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 HYAL4Q2M3T9 481 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 PAOXQ6QHF9 649 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 PRR22Q8IZ63 422 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 LRRC25Q8N386 305 aaPredicted RBP18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 ZNF681Q96N22 645 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 SHCBP1LQ9BZQ2 653 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 ZNF703Q9H7S9 590 aaPredicted RBP18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 TNFRSF12AQ9NP84 129 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 PFDN4Q9NQP4 134 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 TNFRSF10DQ9UBN6 386 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 BCAP29Q9UHQ4 241 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 PSME2Q9UL46 239 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 ZNF780BQ9Y6R6 833 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 NCKAP5O14513 1909 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 EXPH5Q8NEV8 1989 aa18.37■□□□□ 0.53
SHCBP1-203ENST00000564272 NPIPA2E9PIF3 369 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 NPIPA3F8WFD2 350 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 HNRNPRO43390 633 aaKnown RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 CBX7O95931 251 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 IGHG3P01860 377 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 RFPL3SP0C7P2 107 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 CPA3P15088 417 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 PCSK2P16519 638 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 DNAJB13P59910 316 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 MAP4K2Q12851 820 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 CACNA1CQ13936 2221 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 RPS6KA2Q15349 733 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 ZNF630Q2M218 657 aaPredicted RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 EMC4Q5J8M3 183 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 CFAP157Q5JU67 520 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 BICRALQ6AI39 1079 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 TRILQ7L0X0 811 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms