RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 ALG2Q9H553 416 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 NANOGQ9H9S0 305 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 BRF2Q9HAW0 419 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 UBAP1Q9NZ09 502 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 MKL2Q9ULH7 1088 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 CNTRLQ7Z7A1 2325 aa13.83□□□□□ -0.19
SCAMP2-203ENST00000563663 NPIPB8E9PQR5 432 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 FAM58BPP0C7Q3 252 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 COX6A1P12074 109 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 IL12AP29459 219 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 ARL1P40616 181 aaPredicted RBP13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 TSFMP43897 325 aaKnown RBP13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 RPL5P46777 297 aaKnown RBP13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 GSK3BP49841 420 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 SKP1P63208 163 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 Q0VFX4 171 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 CHAF1BQ13112 559 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 AP5B1Q2VPB7 878 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 SGO1Q5FBB7 561 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 FOXB2Q5VYV0 432 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 OR4C11Q6IEV9 310 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 HMBOX1Q6NT76 420 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 CYP20A1Q6UW02 462 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 RAB43Q86YS6 212 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 FAM9CQ8IZT9 166 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 EXD3Q8N9H8 876 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 SELENOMQ8WWX9 145 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 VPS33AQ96AX1 596 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 IL1RL2Q9HB29 575 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 LYRM4Q9HD34 91 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 AGPAT4Q9NRZ5 378 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 SNX6Q9UNH7 406 aa13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 EIF3LQ9Y262 564 aaKnown RBP13.83□□□□□ -0.2
SCAMP2-203ENST00000563663 CPAMD8Q8IZJ3 1885 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ARPC2O15144 300 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 B3GALT2O43825 422 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ALOX12BO75342 701 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ULK1O75385 1050 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 CEACAM4O75871 244 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 RNH1P13489 461 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 FASP25445 335 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 EMP2P54851 167 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 RAB38P57729 211 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 BTG2P78543 158 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 LIPEQ05469 1076 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 CAPRIN1Q14444 709 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 KIAA0040Q15053 153 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 PCOLCEQ15113 449 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 DCAF10Q5QP82 559 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 BORAQ6PGQ7 559 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 QSOX2Q6ZRP7 698 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ZBTB49Q6ZSB9 765 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 CHERPQ8IWX8 916 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ADGRG5Q8IZF4 528 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 METTL4Q8N3J2 472 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 PLPP5Q8NEB5 264 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 SRFBP1Q8NEF9 429 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 OR8J3Q8NGG0 315 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 RGMAQ96B86 450 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 CENPNQ96H22 339 aaPredicted RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 YIPF2Q9BWQ6 316 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 MRPS26Q9BYN8 205 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 YIPF3Q9GZM5 350 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 FBXL4Q9UKA2 621 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 RALYQ9UKM9 306 aaKnown RBP13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 MAN2B2Q9Y2E5 1009 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 ASB4Q9Y574 426 aa13.82□□□□□ -0.2
SCAMP2-203ENST00000563663 IGHV1-45A0A0A0MS14 117 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 TCRBV5S2A0A599 114 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 C7orf72A4D263 438 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 ARGFXA6NJG6 315 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 ERVH48-1M5A8F1 160 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 HSD3B1P14060 373 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 HSD3B2P26439 372 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 SSR2P43308 183 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 SH3BGRP55822 239 aaPredicted RBP13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 ZNF33BQ06732 778 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 CSTF3Q12996 717 aaKnown RBP13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 NR6A1Q15406 480 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 MTX3Q5HYI7 312 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 TBCELQ5QJ74 424 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 SCIMPQ6UWF3 145 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 FKBP9P1Q75LS8 142 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 SPPL2CQ8IUH8 684 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 DNAJB14Q8TBM8 379 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 PPWD1Q96BP3 646 aaKnown RBP13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 SEMA4CQ9C0C4 833 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 NECTIN3Q9NQS3 549 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 ATG4BQ9Y4P1 393 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 IGHEP01854 428 aa13.81□□□□□ -0.2
SCAMP2-203ENST00000563663 KRT6AP02538 564 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms