RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 CHTF18Q8WVB6 975 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.52■□□□□ 0.08
CLK3-210ENST00000563112 SDCCAG3Q96C92 435 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 KLHL29Q96CT2 875 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 SMC6Q96SB8 1091 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 BRINP2Q9C0B6 783 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 EXO5Q9H790 373 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 SH2D2AQ9NP31 389 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 MCM8Q9UJA3 840 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 CES1P1Q9UKY3 287 aa15.52■□□□□ 0.08
CLK3-210ENST00000563112 PKDREJQ9NTG1 2253 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 GNG14A0A1W2PPG7 69 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 A0A1W2PPM1 405 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 BCKDKO14874 412 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 CT62P0C5K7 136 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 FEN1P39748 380 aaKnown RBP15.51■□□□□ 0.07
CLK3-210ENST00000563112 MAN2A2P49641 1150 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ACSM2AQ08AH3 577 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 NTRK2Q16620 822 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 GXYLT1Q4G148 440 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 SPIN4Q56A73 249 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 PRAMEF20Q5VT98 475 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ACSM2BQ68CK6 577 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 TRILQ7L0X0 811 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 TICAM1Q8IUC6 712 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 VWA5B2Q8N398 1253 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ZNF615Q8N8J6 731 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ZNF441Q8N8Z8 693 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 LRRN4CLQ8ND94 238 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 OR10G3Q8NGC4 313 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 OR5M3Q8NGP4 307 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ASB5Q8WWX0 329 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 DIO2Q92813 273 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 ZFP64Q9NPA5 681 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 B4GALT7Q9UBV7 327 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 BCAP29Q9UHQ4 241 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 GRID1Q9ULK0 1009 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 NPFFR2Q9Y5X5 522 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 CACNA1CQ13936 2221 aa15.51■□□□□ 0.07
CLK3-210ENST00000563112 A0A1B0GVC2 190 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 H3BQF6 201 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 AQP7O14520 342 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 PCDH7O60245 1069 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 SUSD5O60279 629 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 HCN1O60741 890 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 ATP1B1P05026 303 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 DRD2P14416 443 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 SLCO1A2P46721 670 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 MAP4K2Q12851 820 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 RPS6KA2Q15349 733 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 CCDC153Q494R4 210 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 TMEM198Q66K66 360 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 ZYG11AQ6WRX3 759 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 ACAD11Q709F0 780 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 TDRPQ86YL5 185 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 MCEMP1Q8IX19 187 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 C17orf47Q8NEP4 570 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 SARAFQ96BY9 339 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 JSRP1Q96MG2 331 aaPredicted RBP15.5■□□□□ 0.07
CLK3-210ENST00000563112 DOHHQ9BU89 302 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 L2HGDHQ9H9P8 463 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 MID1IP1Q9NPA3 183 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 PFDN4Q9NQP4 134 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 QPCTLQ9NXS2 382 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 UTS2RQ9UKP6 389 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 DLGAP4Q9Y2H0 992 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 CHCHD2Q9Y6H1 151 aaPredicted RBP15.5■□□□□ 0.07
CLK3-210ENST00000563112 APCP25054 2843 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 NINQ8N4C6 2090 aa15.5■□□□□ 0.07
CLK3-210ENST00000563112 TRGV5A0A0B4J1U4 118 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 ANKRD33BA6NCL7 494 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 SMIM23A6NLE4 172 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 FIGNL2A6NMB9 653 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 CRCPO75575 148 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 SHBGP04278 402 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 CHN1P15882 459 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 TNFRSF8P28908 595 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 PTGER4P35408 488 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 HEPACAMQ14CZ8 416 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 PRICKLE4Q2TBC4 344 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 CFAP157Q5JU67 520 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 WLSQ5T9L3 541 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 FAM111BQ6SJ93 734 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 TMEM64Q6YI46 380 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 SAMD14Q8IZD0 417 aaPredicted RBP15.49■□□□□ 0.07
CLK3-210ENST00000563112 MMP21Q8N119 569 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 LRRC25Q8N386 305 aaPredicted RBP15.49■□□□□ 0.07
CLK3-210ENST00000563112 CCDC63Q8NA47 563 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 OR5M9Q8NGP3 310 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 RND1Q92730 232 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 ADIPOR1Q96A54 375 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 SECISBP2Q96T21 854 aaKnown RBP15.49■□□□□ 0.07
CLK3-210ENST00000563112 ACPTQ9BZG2 426 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 GSTO2Q9H4Y5 243 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 PNPLA3Q9NST1 481 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 GIMAP4Q9NUV9 329 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 MAT2BQ9NZL9 334 aa15.49■□□□□ 0.07
CLK3-210ENST00000563112 CNOT11Q9UKZ1 510 aaKnown RBP15.49■□□□□ 0.07
CLK3-210ENST00000563112 EMCNQ9ULC0 261 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms