RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ANKRD20A3Q5VUR7 823 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SNRNP48Q6IEG0 339 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 HIPK1Q86Z02 1210 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ZBED8Q8IZ13 594 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CCDC197Q8NCU1 140 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 SPATA18Q8TC71 538 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 TCP11Q8WWU5 503 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ULK4Q96C45 1275 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ERGIC2Q96RQ1 377 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ZNF559Q9BR84 538 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ADPGKQ9BRR6 497 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 UTP14AQ9BVJ6 771 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 CUTCQ9NTM9 273 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 DNAJC17Q9NVM6 304 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 DNAJB9Q9UBS3 223 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 NRXN1Q9ULB1 1477 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 TOPAZ1Q8N9V7 1692 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ITSN1Q15811 1721 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 COL24A1Q17RW2 1714 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 PARP4Q9UKK3 1724 aaKnown RBP2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 ADGRB2O60241 1585 aa2.36□□□□□ -2.03
HDGFL3-202ENST00000562702 LRRC37A3O60309 1634 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CCDC144AA2RUR9 1427 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PIK3C2GO75747 1445 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 C13orf42A0A1B0GVH6 325 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 BICDL2A1A5D9 508 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 NEDD8-MDP1E9PL57 170 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PDGFBP01127 241 aaPredicted RBP2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CALCAP01258 141 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 FHP07954 510 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 VDRP11473 427 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ODC1P11926 461 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 GJB2P29033 226 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ST8SIA6P61647 398 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PPIAP62937 165 aaKnown RBP2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ROR1Q01973 937 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 MFGE8Q08431 387 aaPredicted RBP2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 MEP1BQ16820 701 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PCK2Q16822 640 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CCDC158Q5M9N0 1113 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 C1orf189Q5VU69 101 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 C11orf88Q6PI97 169 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 OTOAQ7RTW8 1153 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 C17orf64Q86WR6 236 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CLYBLQ8N0X4 340 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ICA1LQ8NDH6 482 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 AP2M1Q96CW1 435 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 RBM18Q96H35 190 aaKnown RBP2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CDHR1Q96JP9 859 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 PRAM1Q96QH2 718 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 NAPBQ9H115 298 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ABCD2Q9UBJ2 740 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ERVK-19Q9WJR5 959 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 VSIG4Q9Y279 399 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 EXOC6BQ9Y2D4 811 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 FBXO7Q9Y3I1 522 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 ADGRB1O14514 1584 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 SBNO1A3KN83 1393 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 CCDC88AQ3V6T2 1871 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 KIAA0232Q92628 1395 aa2.35□□□□□ -2.03
HDGFL3-202ENST00000562702 DISP2A7MBM2 1401 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 SHANK3Q9BYB0 1731 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 RGPD3A6NKT7 1758 aaPredicted RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 LTN1O94822 1766 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 RGPD4Q7Z3J3 1758 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 TAF1LQ8IZX4 1826 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 ATP6AP2A0A1C7CYW4 349 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 FAM170AA1A519 330 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 SRRM4A7MD48 611 aaKnown RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 TTI1O43156 1089 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 KIAA0513O60268 411 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 KBTBD11O94819 623 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 OR6A2O95222 327 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 THY1P04216 161 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 OR9G9P0C7N8 305 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 GLULP15104 373 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 EZRP15311 586 aaKnown RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 ID1P41134 155 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 ALDH3B1P43353 468 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 MAGEB1P43366 347 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 BRCC3P46736 316 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 ADARP55265 1226 aaKnown RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 NFE2L1Q14494 772 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 MEF2DQ14814 521 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 SPHARQ15513 63 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 CCL14Q16627 93 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 TYSND1Q2T9J0 566 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 HECTD3Q5T447 861 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 LINC00242Q5T6M2 205 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 CAPN13Q6MZZ7 669 aaPredicted RBP2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 NHLRC1Q6VVB1 395 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 GBP6Q6ZN66 633 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 NUP93Q8N1F7 819 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 CD177Q8N6Q3 437 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 GVQW1Q8N7I0 195 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 SAMD12Q8N8I0 201 aa2.34□□□□□ -2.03
HDGFL3-202ENST00000562702 GOT1L1Q8NHS2 421 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms