RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 RIMKLBQ9ULI2 386 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SLC6A14Q9UN76 642 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CROCCQ5TZA2 2017 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ZCWPW2A0A1B0GU75 182 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 hCG_2039718K7EN88 272 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 AP3D1O14617 1153 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 VEGFDO43915 354 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CDRT1O95170 752 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 LRATO95237 230 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CER1O95813 267 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 TGM6O95932 706 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PEX11BO96011 259 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 POU3F3P20264 500 aaPredicted RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 EVI2BP34910 448 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CA5AP35218 305 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CSNK1DP48730 415 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SUOXP51687 545 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 UGT2B15P54855 530 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 EMX1Q04741 257 aaPredicted RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ACSM2AQ08AH3 577 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 BTN1A1Q13410 526 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PTCHD3Q3KNS1 767 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 FAM209AQ5JX71 171 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 TMEM164Q5U3C3 297 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ACSM2BQ68CK6 577 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ZNF367Q7RTV3 350 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 TMEM17Q86X19 198 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 DPP10Q8N608 796 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 MZB1Q8WU39 189 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 FUBP1Q96AE4 644 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 RTP4Q96DX8 246 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SMAD5Q99717 465 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 C20orf27Q9GZN8 174 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PRO3102Q9H379 93 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 RANGRFQ9HD47 186 aaPredicted RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 MRPS30Q9NP92 439 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 IL1RAPQ9NPH3 570 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SNX6Q9UNH7 406 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PCDHGB3Q9Y5G1 929 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PCDHGB2Q9Y5G2 931 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ZNF860A6NHJ4 632 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CLDN24A6NM45 220 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 RGS13O14921 159 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 REM1O75628 298 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CPNE6O95741 557 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 COX7A2P14406 83 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PVRP15151 417 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PCSK2P16519 638 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 GADD45AP24522 165 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CCR10P46092 362 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 FADDQ13158 208 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 LAPTM5Q13571 262 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 HLA-BQ31612 363 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CDKL4Q5MAI5 379 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CEP97Q8IW35 865 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 KDM1BQ8NB78 822 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PAPD5Q8NDF8 572 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 CHDHQ8NE62 594 aaPredicted RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 TESCQ96BS2 214 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 MRPL48Q96GC5 212 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 TM9SF2Q99805 663 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 RBCK1Q9BYM8 510 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 PCDHGA8Q9Y5G5 932 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 OAS3Q9Y6K5 1087 aaKnown RBP6.5□□□□□ -1.37
LINC02249-202ENST00000562624 A3GALT2U3KPV4 340 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 SPACA6W5XKT8 324 aa6.5□□□□□ -1.37
LINC02249-202ENST00000562624 ACACBO00763 2458 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 CHST10O43529 356 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 PAPSS2O95340 614 aaPredicted RBP6.49□□□□□ -1.37
LINC02249-202ENST00000562624 GBAP04062 536 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 CMPK1P30085 196 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 IFNGR2P38484 337 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 SSR2P43308 183 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 ZNF140P52738 457 aaPredicted RBP6.49□□□□□ -1.37
LINC02249-202ENST00000562624 PRKAG1P54619 331 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 AP3S2P59780 193 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 RAB8AP61006 207 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 TSPAN5P62079 268 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 HERVK_113P63132 956 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 FAPQ12884 760 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 DUOXA1Q1HG43 343 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 CYBRD1Q53TN4 286 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 NRARPQ7Z6K4 114 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 KRT78Q8N1N4 520 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 ACVR1CQ8NER5 493 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 ARL5BQ96KC2 179 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 WACQ9BTA9 647 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 ERVK-6Q9BXR3 956 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 CHIAQ9BZP6 476 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 MEAF6Q9HAF1 191 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 GALPQ9UBC7 116 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 ATXN7L1Q9ULK2 861 aaPredicted RBP6.49□□□□□ -1.37
LINC02249-202ENST00000562624 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 CDC123O75794 336 aaPredicted RBP6.49□□□□□ -1.37
LINC02249-202ENST00000562624 NAT2P11245 290 aa6.49□□□□□ -1.37
LINC02249-202ENST00000562624 MLLT3P42568 568 aaPredicted RBP6.49□□□□□ -1.37
LINC02249-202ENST00000562624 AGTR2P50052 363 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms