RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 RAB17Q9H0T7 212 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 WDR41Q9HAD4 459 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 RASSF1Q9NS23 344 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
HERC2-202ENST00000562136 JKAMPQ9P055 326 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 FOXD3Q9UJU5 478 aaPredicted RBP11.48□□□□□ -0.57
HERC2-202ENST00000562136 CES1P1Q9UKY3 287 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 NPFFR2Q9Y5X5 522 aa11.48□□□□□ -0.57
HERC2-202ENST00000562136 NSD1Q96L73 2696 aaPredicted RBP11.48□□□□□ -0.57
HERC2-202ENST00000562136 A0A096LPK6 155 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 CD8B2A6NJW9 211 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 KDM4EB2RXH2 506 aaPredicted RBP11.47□□□□□ -0.57
HERC2-202ENST00000562136 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 STX16O14662 325 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 KRT38O76015 456 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 SIX3O95343 332 aaPredicted RBP11.47□□□□□ -0.57
HERC2-202ENST00000562136 CLDN9O95484 217 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 GFAPP14136 432 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 SSTR4P31391 388 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 CASP3P42574 277 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 KIR2DL3P43628 341 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 ASCL1P50553 236 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 NEK2P51955 445 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 FBXW4P57775 412 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 C2orf54Q08AI8 447 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 GGTA1PQ4G0N0 100 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 NSUN5P2Q63ZY6 315 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 TMEM198Q66K66 360 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 GALNT12Q8IXK2 581 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 PM20D2Q8IYS1 436 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 TNIP2Q8NFZ5 429 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 OR52B6Q8NGF0 335 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 DOK4Q8TEW6 326 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 FAM222BQ8WU58 562 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 DIO2Q92813 273 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 RNASE6Q93091 150 aaKnown RBP11.47□□□□□ -0.57
HERC2-202ENST00000562136 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 MBD6Q96DN6 1003 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 RILPQ96NA2 401 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 OR10A5Q9H207 317 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 EXO5Q9H790 373 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 ZBTB26Q9HCK0 441 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 TEX10Q9NXF1 929 aaPredicted RBP11.47□□□□□ -0.57
HERC2-202ENST00000562136 CRIM1Q9NZV1 1036 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 ZNF639Q9UID6 485 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 ST6GALNAC2Q9UJ37 374 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 ANGPTL3Q9Y5C1 460 aa11.47□□□□□ -0.57
HERC2-202ENST00000562136 MBD3L4A6NDZ8 208 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 MBD3L3A6NE82 208 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 MBD3L5A6NJ08 208 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 A6NNC1 897 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 DVL2O14641 736 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 CDH16O75309 829 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 IL18BPO95998 194 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 ABCB1P08183 1280 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 CPMP14384 443 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 GPX3P22352 226 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 GDF1P27539 372 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 PIK3R1P27986 724 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 ABCD3P28288 659 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 ZNF136P52737 540 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 MAP4K2Q12851 820 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 TRAF3Q13114 568 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.57
HERC2-202ENST00000562136 FLYWCH1Q4VC44 716 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 FRG2Q64ET8 278 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 BICRALQ6AI39 1079 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 TIGD3Q6B0B8 471 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 TMEM64Q6YI46 380 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 WDR53Q7Z5U6 358 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 ADGRE4PQ86SQ3 457 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 MYLK4Q86YV6 388 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 TGIF2LYQ8IUE0 185 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 ZZZ3Q8IYH5 903 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 PLD6Q8N2A8 252 aaKnown RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 METTL4Q8N3J2 472 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 LIX1Q8N485 282 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 OR4K14Q8NGD5 310 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 MBD3L2Q8NHZ7 208 aaPredicted RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 WDYHV1Q96HA8 205 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 FRG2BQ96QU4 278 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 C1QTNF3Q9BXJ4 246 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 ACSS3Q9H6R3 686 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.57
HERC2-202ENST00000562136 CALHM2Q9HA72 323 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 PCTPQ9UKL6 214 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 TMCO1Q9UM00 188 aa11.46□□□□□ -0.57
HERC2-202ENST00000562136 LRATO95237 230 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 GOSR1O95249 250 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 ACSL3O95573 720 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 GBAP04062 536 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 ATP1B1P05026 303 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 PORP16435 677 aaPredicted RBP11.45□□□□□ -0.58
HERC2-202ENST00000562136 BMP7P18075 431 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 PTPN6P29350 595 aa11.45□□□□□ -0.58
HERC2-202ENST00000562136 PTGDSP41222 190 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms