RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CAPN12Q6ZSI9 719 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 PACS2Q86VP3 889 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 MBD3L2Q8NHZ7 208 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 SPPL2AQ8TCT8 520 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 DOK4Q8TEW6 326 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 AENQ8WTP8 325 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 PYROXD1Q8WU10 500 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 EXT2Q93063 718 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 NTNG2Q96CW9 530 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 ATOH8Q96SQ7 321 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 ZNF717Q9BY31 904 aaPredicted RBP10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 TRIM31Q9BZY9 425 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 RAB17Q9H0T7 212 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 EPB41L4BQ9H329 900 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 ALG9Q9H6U8 611 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 DDX31Q9H8H2 851 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 PLEKHF2Q9H8W4 249 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 NMRAL1Q9HBL8 299 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 MED4Q9NPJ6 270 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 LYARQ9NX58 379 aaKnown RBP10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 ASB4Q9Y574 426 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 PCDHGA11Q9Y5H2 935 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 MPDZO75970 2070 aa10.83□□□□□ -0.68
CARMIL3-204ENST00000561354 A0A0A6YYD5 115 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 A0A1W2PR48 441 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 TCRBV9S1A1TA0A576 114 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 FAM187AA6NFU0 413 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 FAM159BA6NKW6 160 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 WASHC1A8K0Z3 465 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 KERAO60938 352 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 LRATO95237 230 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 ACSL3O95573 720 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 NR2F6P10588 404 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 CTSSP25774 331 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 HOXC12P31275 282 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 BSGP35613 385 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 TMED10P49755 219 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 FBXW4P57775 412 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 RPP38P78345 283 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 CUL3Q13618 768 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 HSP90B2PQ58FF3 399 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 LIPJQ5W064 366 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 RNF175Q8N4F7 328 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 C17orf47Q8NEP4 570 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 WFDC11Q8NEX6 87 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 WDYHV1Q96HA8 205 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 TMEM41AQ96HV5 264 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 C18orf12Q96KH6 178 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 RILPQ96NA2 401 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 GNRHR2Q96P88 292 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 TRIB1Q96RU8 372 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 MTERF1Q99551 399 aaKnown RBP10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 UGT2B28Q9BY64 529 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 CALHM2Q9HA72 323 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 WDR41Q9HAD4 459 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 CXorf21Q9HAI6 301 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 PSD3Q9NYI0 1048 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 FETUBQ9UGM5 382 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 SNX24Q9Y343 169 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 NPFFR2Q9Y5X5 522 aa10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 ZNF469Q96JG9 3925 aaPredicted RBP10.82□□□□□ -0.68
CARMIL3-204ENST00000561354 GLOD5A6NK44 160 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 CLCA1A8K7I4 914 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 SUPT3HB4E1H0 165 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 H0YIV9 168 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 UBXN8O00124 270 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 EIF3HO15372 352 aaKnown RBP eCLIP10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 TMPRSS11DO60235 418 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 UGDHO60701 494 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 CDH16O75309 829 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 SUPT3HO75486 399 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 EEDO75530 441 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 SASH3O75995 380 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 FAM58BPP0C7Q3 252 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 MTHFD2P13995 350 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 BMP7P18075 431 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 SSTR4P31391 388 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 SPRP35270 261 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 CASP3P42574 277 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 MASP1P48740 699 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 NRG3P56975 720 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 RPS13P62277 151 aaKnown RBP10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 PHEXP78562 749 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 GABPB1Q06547 395 aaPredicted RBP10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 LTBQ06643 244 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 FUT7Q11130 342 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 DLG1Q12959 904 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 GRTP1Q5TC63 336 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 HLA-DQA1Q5Y7H0 255 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 BICRALQ6AI39 1079 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 CYP20A1Q6UW02 462 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 TEX9Q8N6V9 391 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 GOLGA6L1Q8N7Z2 621 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 LINC01560Q8TB33 94 aa10.81□□□□□ -0.68
CARMIL3-204ENST00000561354 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms