RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PRRG2O14669 202 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 EI24O14681 340 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SH2D1BO14796 132 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 AIM2O14862 343 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NUAK1O60285 661 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TSPAN2O60636 221 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF623O75123 536 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NDUFS7O75251 213 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NIPSNAP2O75323 286 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 HSBP1O75506 76 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ANXA9O76027 345 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CLPXO76031 633 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NDUFA7O95182 113 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CLDN9O95484 217 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 EML2O95834 649 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 WDPCPO95876 746 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TXNDC12O95881 172 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SYF2O95926 243 aaKnown RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 CHRNA1P02708 482 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 WNT1P04628 370 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TFAP2AP05549 437 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CRYGCP07315 174 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ADRB1P08588 477 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ALOX5P09917 674 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ACP2P11117 423 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 EGR2P11161 476 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 CHRNB1P11230 501 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PRPS2P11908 318 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ANXA3P12429 323 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CEACAM1P13688 526 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 HPGDP15428 266 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 JUNBP17275 347 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 GSTM3P21266 225 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF10P21506 573 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 CPN2P22792 545 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ACKR3P25106 362 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ACRV1P26436 265 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 HMGB2P26583 209 aaKnown RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 GJB2P29033 226 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PCSK6P29122 969 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 EPHA2P29317 976 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PPP2R1BP30154 601 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 IFNA8P32881 189 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CNR2P34972 360 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 UGT1A5P35504 534 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PCK1P35558 622 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ATP5C1P36542 298 aaKnown RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 MPLP40238 635 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ETV5P41161 510 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 MAGEA5P43359 124 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ARRB1P49407 418 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 LBX1P52954 281 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ACLYP53396 1101 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CDH11P55287 796 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PITX1P78337 314 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 JAG1P78504 1218 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NTHL1P78549 312 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SIM1P81133 766 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZXDBP98169 803 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 LIPEQ05469 1076 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF91Q05481 1191 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF415Q09FC8 603 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 BST2Q10589 180 aaKnown RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 MAB21L1Q13394 359 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 XRCC4Q13426 336 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PEX6Q13608 980 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CYTH1Q15438 398 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SYPL1Q16563 259 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TMEM44Q2T9K0 475 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 LRRC37A5PQ49AS3 106 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PHLDA2Q53GA4 152 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 BEX5Q5H9J7 111 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 MTX3Q5HYI7 312 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 C6orf226Q5I0X4 101 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 NKAPLQ5M9Q1 402 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SPDYCQ5MJ68 293 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 C6orf183Q5T699 404 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 GRTP1Q5TC63 336 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PRAMEF17Q5VTA0 474 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 AGAP7PQ5VUJ5 663 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SPECC1LQ69YQ0 1117 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PTRHD1Q6GMV3 140 aaKnown RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 OR7E24Q6IFN5 339 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF770Q6IQ21 691 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 CAPN13Q6MZZ7 669 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 SLC39A4Q6P5W5 647 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TTC23LQ6PF05 361 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 DEGS2Q6QHC5 323 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 DHRS11Q6UWP2 260 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 C6orf89Q6UWU4 347 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 CEACAM20Q6UY09 585 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ZNF841Q6ZN19 808 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 LRRC74BQ6ZQY2 392 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 SLC24A5Q71RS6 500 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 TECPR1Q7Z6L1 1165 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 RANBP3LQ86VV4 465 aaPredicted RBP1.87□□□□□ -2.11
RTF1-207ENST00000561076 SERPINA9Q86WD7 417 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 C17orf64Q86WR6 236 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 PLCZ1Q86YW0 608 aa1.87□□□□□ -2.11
RTF1-207ENST00000561076 ERI1Q8IV48 349 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms