RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM167BQ9BTA0 163 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 REXO4Q9GZR2 422 aaKnown RBP9.03□□□□□ -0.96
TPM1-225ENST00000560679 WWTR1Q9GZV5 400 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 SAYSD1Q9NPB0 183 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 KLHL28Q9NXS3 571 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 SLC17A6Q9P2U8 582 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 LGALS13Q9UHV8 139 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 KCNE2Q9Y6J6 123 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 ABCA1O95477 2261 aa9.03□□□□□ -0.96
TPM1-225ENST00000560679 A0A087WUV0 522 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 A0A088AWK7 358 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 ANKRD33BA6NCL7 494 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 SDR42E2A6NKP2 422 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 GOLGA8MH3BSY2 632 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 SNPHO15079 494 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 PRAMEF4O60810 478 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 CLEC3AO75596 197 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 TNFSF13O75888 250 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 RCBTB2O95199 551 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 MLNP12872 115 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 MC3RP41968 323 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 GDF5P43026 501 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 MSH2P43246 934 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 STT3AP46977 705 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 NR1H2P55055 460 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 FBXW4P57775 412 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 IL2P60568 153 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 FAM27E3Q08E93 113 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 RPS6KA2Q15349 733 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 SF3B4Q15427 424 aaKnown RBP eCLIP9.02□□□□□ -0.97
TPM1-225ENST00000560679 WIPI1Q5MNZ9 446 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 PRAMEF9Q5VWM5 478 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 TRIM40Q6P9F5 258 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 PODNL1Q6PEZ8 512 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 TMEM64Q6YI46 380 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 OR4N5Q8IXE1 308 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 DND1Q8IYX4 353 aaKnown RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 RIBC1Q8N443 379 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 TTLQ8NG68 377 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 GABPB2Q8TAK5 448 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 ZPLD1Q8TCW7 415 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 CALML6Q8TD86 181 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 TMEM158Q8WZ71 300 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 DIO2Q92813 273 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 ABTB1Q969K4 478 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 PPWD1Q96BP3 646 aaKnown RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 RILPQ96NA2 401 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 ZFP3Q96NJ6 502 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 GAL3ST4Q96RP7 486 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 COPS7BQ9H9Q2 264 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 LYRM4Q9HD34 91 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 ZNF701Q9NV72 531 aaPredicted RBP9.02□□□□□ -0.97
TPM1-225ENST00000560679 NDRG3Q9UGV2 375 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 MAD1L1Q9Y6D9 718 aa9.02□□□□□ -0.97
TPM1-225ENST00000560679 A0A087X1B8 175 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 A0A1W2PNV4 684 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 MAGEB16A2A368 324 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 PABPN1LA6NDY0 278 aaKnown RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 NPEPPSL1A6NEC2 478 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 CDC7O00311 574 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 RTCAO00442 366 aaKnown RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 PHF1O43189 567 aaPredicted RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 AHSGP02765 367 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 CYP4B1P13584 511 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 CD22P20273 847 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 GSTM2P28161 218 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 PTPN6P29350 595 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 SERPINB3P29508 390 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 SLC6A12P48065 614 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 ARL4CP56559 192 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 HERVK_113P63132 956 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 ERVK-8P63133 956 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 RCAN2Q14206 197 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 RCN2Q14257 317 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 CRYMQ14894 314 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 TBCELQ5QJ74 424 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 C22orf34Q6ZV56 151 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 MEIOBQ8N635 442 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 NAT8LQ8N9F0 302 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 FAM83FQ8NEG4 500 aaPredicted RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 SPPL2AQ8TCT8 520 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 BCAS4Q8TDM0 211 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 SIGLEC10Q96LC7 697 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 DGAT2Q96PD7 388 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 F2RL3Q96RI0 385 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 UCN2Q96RP3 112 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 SECISBP2Q96T21 854 aaKnown RBP9.01□□□□□ -0.97
TPM1-225ENST00000560679 ERVK-6Q9BXR3 956 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 ANGPTL4Q9BY76 406 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 TRIM54Q9BYV2 358 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 PIGMQ9H3S5 423 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 NT5DC2Q9H857 520 aa9.01□□□□□ -0.97
TPM1-225ENST00000560679 PPCSQ9HAB8 311 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms