RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SLC22A16Q86VW1 577 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 SNX31Q8N9S9 440 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 GOLM1Q8NBJ4 401 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 TMEM52Q8NDY8 209 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 OR2M7Q8NG81 312 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 AGR3Q8TD06 166 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 UBE2E3Q969T4 207 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 ATOH8Q96SQ7 321 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 CSF3RQ99062 836 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 TBCDQ9BTW9 1192 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 ZDHHC11Q9H8X9 412 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 MCCC2Q9HCC0 563 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 CD274Q9NZQ7 290 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 KCMF1Q9P0J7 381 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 POLQO75417 2590 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 OR14I1A6ND48 311 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 UBXN8O00124 270 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 PRKNO60260 465 aaPredicted RBP12.57□□□□□ -0.4
SMAD3-214ENST00000560402 OR2J2O76002 312 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 SCELO95171 688 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 COX7A2P14406 83 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 IGFBP2P18065 325 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 SOX3P41225 446 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 HSPA7P48741 367 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 IRF8Q02556 426 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 TLE4Q04727 773 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 DOC2AQ14183 400 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 OR4D1Q15615 310 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 PFKFB4Q16877 469 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 TMEM35AQ53FP2 167 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 RTL4Q6ZR62 310 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 OR5L2Q8NGL0 311 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 RND1Q92730 232 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 SGCZQ96LD1 299 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 FAM173AQ9BQD7 235 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 EBF4Q9BQW3 602 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 MS4A8Q9BY19 250 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 SLC24A3Q9HC58 644 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
SMAD3-214ENST00000560402 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
SMAD3-214ENST00000560402 EML6Q6ZMW3 1958 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 TMEM200CA6NKL6 621 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 BCKDKO14874 412 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 ZNHIT1O43257 154 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 DYRK3O43781 588 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 OR6B1O95007 311 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 ENO1P06733 434 aaKnown RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CD22P20273 847 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CASP2P42575 452 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 PPIAP62937 165 aaKnown RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 TBL3Q12788 808 aaKnown RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 LCP2Q13094 533 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 BIKQ13323 160 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 MAPRE2Q15555 327 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 PDCD2Q16342 344 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 OPN5Q6U736 354 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 IL20RBQ6UXL0 311 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CDH24Q86UP0 819 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CLYBLQ8N0X4 340 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 FAM109AQ8N4B1 249 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 MARVELD2Q8N4S9 558 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 OR52N2Q8NGI0 321 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CEP70Q8NHQ1 597 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 SLC2A12Q8TD20 617 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 ART5Q96L15 291 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 ALOXE3Q9BYJ1 711 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 TTTY12Q9BZ98 90 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 MMADHCQ9H3L0 296 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 GSTO2Q9H4Y5 243 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 PRDM7Q9NQW5 492 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 DEPPQ9NTK1 212 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 ARL8BQ9NVJ2 186 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
SMAD3-214ENST00000560402 RNF6Q9Y252 685 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 C2CD3Q4AC94 2353 aa12.56□□□□□ -0.4
SMAD3-214ENST00000560402 CAPN14A8MX76 684 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ZNF195O14628 629 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 KLK8O60259 260 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CCNT2O60583 730 aaKnown RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 IGHG3P01860 377 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 HIST1H1TP22492 207 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 MSX1P28360 303 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ARRB2P32121 409 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 PIK3CGP48736 1102 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 STX1BP61266 288 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 RNF4P78317 190 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 PCDH1Q08174 1060 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CHIT1Q13231 466 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms