RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 STARD4Q96DR4 205 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 C16orf45Q96MC5 204 aaPredicted RBP11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 FAM111AQ96PZ2 611 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 SLC17A6Q9P2U8 582 aa11.62□□□□□ -0.55
RABGGTA-213ENST00000560127 NPEPPSL1A6NEC2 478 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 CAPN14A8MX76 684 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 HAX1O00165 279 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 WIPF1O43516 503 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 SMNDC1O75940 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 SCELO95171 688 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 TGM6O95932 706 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 TP53P04637 393 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 ALOX15P16050 662 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 HIST1H1TP22492 207 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 HNMTP50135 292 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 CDKL1Q00532 357 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 VEZF1Q14119 521 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 SPRED3Q2MJR0 410 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF572Q7Z3I7 529 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 GRAMD2AQ8IUY3 354 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 IGDCC3Q8IVU1 814 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 CNTN4Q8IWV2 1026 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 TRIM42Q8IWZ5 723 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 ST13P4Q8IZP2 240 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 UCN3Q969E3 161 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 EGFL8Q99944 293 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 TBCDQ9BTW9 1192 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 REG4Q9BYZ8 158 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 ROGDIQ9GZN7 287 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 OPN3Q9H1Y3 402 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 VWA7Q9Y334 891 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 SPACA6W5XKT8 324 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 MGAM2Q2M2H8 2515 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 DYSFO75923 2080 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 TGP01266 2768 aa11.61□□□□□ -0.55
RABGGTA-213ENST00000560127 C2orf92A0A1B0GVN3 265 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 LRRC14BA6NHZ5 514 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PLOD2O00469 737 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 TMCC2O75069 709 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PRKRAO75569 313 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PLAUP00749 431 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 POU2F1P14859 743 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 CD22P20273 847 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 CHMP24386 653 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 CASQ1P31415 396 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 STARP49675 285 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 LHX2P50458 406 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 DR1Q01658 176 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 FUT7Q11130 342 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 BIKQ13323 160 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 CRYMQ14894 314 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PPP1R7Q15435 360 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 C18orf63Q68DL7 685 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 ENPP6Q6UWR7 440 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 ANGPTL8Q6UXH0 198 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 SRFBP1Q8NEF9 429 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 SPATA4Q8NEY3 305 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 OR1J4Q8NGS1 313 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 TP53INP1Q96A56 240 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 RHBDF1Q96CC6 855 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 PGM2Q96G03 612 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 KRT12Q99456 494 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 MS4A8Q9BY19 250 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 EHD1Q9H4M9 534 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 RPF2Q9H7B2 306 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 SNX15Q9NRS6 342 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 GPRC5BQ9NZH0 403 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 ASIC3Q9UHC3 531 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 OARD1Q9Y530 152 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 MEGF8Q7Z7M0 2845 aa11.6□□□□□ -0.55
RABGGTA-213ENST00000560127 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 WASHC1A8K0Z3 465 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 C16orf97H3BN30 126 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 CCDC188H7C350 402 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 KLF4O43474 513 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 RAD51CO43502 376 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 HCRTR2O43614 444 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 SH3BGRLO75368 114 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 CRHP06850 196 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 THBDP07204 575 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 FAM157CP0CG43 387 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF37AP17032 561 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 SSTR4P31391 388 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 GCKP35557 465 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 GFRA1P56159 465 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 PCDH1Q08174 1060 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 DOC2AQ14183 400 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 SETDB1Q15047 1291 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 AP5B1Q2VPB7 878 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 SCIMPQ6UWF3 145 aa11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 ZNF704Q6ZNC4 412 aaPredicted RBP11.59□□□□□ -0.55
RABGGTA-213ENST00000560127 SH2D5Q6ZV89 423 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms