RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RBM12BQ8IXT5 1001 aaKnown RBP16.76■□□□□ 0.27
SNX1-208ENST00000559844 ATG16L2Q8NAA4 619 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 UCN3Q969E3 161 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 BARD1Q99728 777 aaKnown RBP16.76■□□□□ 0.27
SNX1-208ENST00000559844 FBXW2Q9UKT8 454 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 PCDHGA8Q9Y5G5 932 aa16.76■□□□□ 0.27
SNX1-208ENST00000559844 GSAPA4D1B5 854 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 OR6C74A6NCV1 312 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 TNFRSF11BO00300 401 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 DNAJB5O75953 348 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 BCHEP06276 602 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 CKMT1AP12532 417 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 POLR2CP19387 275 aaPredicted RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 ELK4P28324 431 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 BTN3A2P78410 334 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 SLC48A1Q6P1K1 146 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 FBXO42Q6P3S6 717 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 SLC38A5Q8WUX1 472 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 RASSF5Q8WWW0 418 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 TM4SF19Q96DZ7 209 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 SLC38A3Q99624 504 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 RIBC2Q9H4K1 309 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 KRT84Q9NSB2 600 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 P2RX2Q9UBL9 471 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 KLK4Q9Y5K2 254 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 PROM1O43490 865 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 ERAL1O75616 437 aaKnown RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 TFPTP0C1Z6 253 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 CSNK2A2P19784 350 aaPredicted RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 MAGP20916 626 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 TTKP33981 857 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 KHKP50053 298 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 LIMK1P53667 647 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 GABARAPL2P60520 117 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 RPS26P62854 115 aaKnown RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 LAPTM4AQ15012 233 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 C6orf141Q5SZD1 244 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 ZNF773Q6PK81 442 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 FIGLAQ6QHK4 219 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 GPR141Q7Z602 305 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 TSEN54Q7Z6J9 526 aaKnown RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 GALNT5Q7Z7M9 940 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 ALDH16A1Q8IZ83 802 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 OR10G6Q8NH81 332 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 CCDC74AQ96AQ1 378 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 TMEM19Q96HH6 336 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 ADNPQ9H2P0 1102 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 EXD2Q9NVH0 621 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 EVA1BQ9NVM1 165 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 PSME2Q9UL46 239 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 FAM32AQ9Y421 112 aaKnown RBP16.75■□□□□ 0.27
SNX1-208ENST00000559844 LYVE1Q9Y5Y7 322 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 CEPT1Q9Y6K0 416 aa16.75■□□□□ 0.27
SNX1-208ENST00000559844 DMXL1Q9Y485 3027 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 HMGN4O00479 90 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 B4GALT2O60909 372 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 MITFO75030 526 aaPredicted RBP16.74■□□□□ 0.27
SNX1-208ENST00000559844 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 ALDH4A1P30038 563 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 ISL1P61371 349 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 IL1RL1Q01638 556 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 SPIBQ01892 262 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 KCNC4Q03721 635 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 ZBED5Q49AG3 693 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 BROXQ5VW32 411 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 TRIM73Q86UV7 250 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 CAMKVQ8NCB2 501 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 CHDHQ8NE62 594 aaPredicted RBP16.74■□□□□ 0.27
SNX1-208ENST00000559844 OR6C4Q8NGE1 309 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 OR56A1Q8NGH5 318 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 GIPC3Q8TF64 312 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 NAT6Q93015 286 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 OR2A5Q96R48 311 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 ZNF607Q96SK3 696 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 APOL4Q9BPW4 351 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 SYNPO2LQ9H987 977 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 VCX3AQ9NNX9 186 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 ZCCHC3Q9NUD5 404 aaKnown RBP16.74■□□□□ 0.27
SNX1-208ENST00000559844 PTTG2Q9NZH5 202 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 PHF11Q9UIL8 331 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 CES1P1Q9UKY3 287 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 TESMINQ9Y4I5 508 aa16.74■□□□□ 0.27
SNX1-208ENST00000559844 A8MVJ9 347 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PGRMC2O15173 223 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 SNRNP200O75643 2136 aaKnown RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 IFNW1P05000 195 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ZNF888P0CJ79 500 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 ZNF10P21506 573 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 CRHBPP24387 322 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 MPIP34949 423 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 PEX19P40855 299 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 DUSP3P51452 185 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 CD47Q08722 323 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 CEBPEQ15744 281 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 FCRL6Q6DN72 434 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 B3GNT6Q6ZMB0 384 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 ZNF438Q7Z4V0 828 aa16.73■□□□□ 0.27
SNX1-208ENST00000559844 Q8N9G6 341 aaPredicted RBP16.73■□□□□ 0.27
SNX1-208ENST00000559844 TTC29Q8NA56 475 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms