RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CDRT15Q96T59 188 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 SH3GL1Q99961 368 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 CADM1Q9BY67 442 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 FAM117AQ9C073 453 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 C3orf14Q9HBI5 128 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 ADAP2Q9NPF8 381 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 PNO1Q9NRX1 252 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 THSD1Q9NS62 852 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 CMTM6Q9NX76 183 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 PTGFRNQ9P2B2 879 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 TMEM181Q9P2C4 612 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 ABCD2Q9UBJ2 740 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 ZNF639Q9UID6 485 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 WASF3Q9UPY6 502 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 FARSAQ9Y285 508 aaKnown RBP16.89■□□□□ 0.29
CLPX-203ENST00000558958 PADI2Q9Y2J8 665 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 CCDC88CQ9P219 2028 aa16.89■□□□□ 0.29
CLPX-203ENST00000558958 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 C21orf140B9A014 251 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 UPK1AO00322 258 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 EMC8O43402 210 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 S1PR1P21453 382 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 PPIBP23284 216 aaKnown RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 CHI3L1P36222 383 aaPredicted RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 SAXO2Q658L1 398 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 BNC2Q6ZN30 1099 aaPredicted RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 GPR155Q7Z3F1 870 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 ANKRD37Q7Z713 158 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 VWA5B2Q8N398 1253 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 DOK4Q8TEW6 326 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 NKD1Q969G9 470 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 MAGED4Q96JG8 741 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 THUMPD3Q9BV44 507 aaKnown RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 TMEM121BQ9BXQ6 578 aaPredicted RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 GPR87Q9BY21 358 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 ZCCHC3Q9NUD5 404 aaKnown RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 DDX18Q9NVP1 670 aaKnown RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 TCFL5Q9UL49 500 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 PRPF19Q9UMS4 504 aaKnown RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 C19orf53Q9UNZ5 99 aaPredicted RBP16.88■□□□□ 0.29
CLPX-203ENST00000558958 AK5Q9Y6K8 562 aa16.88■□□□□ 0.29
CLPX-203ENST00000558958 A8MUA0 341 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 EVPLLA8MZ36 301 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 C17orf105B2RV13 164 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 NME4O00746 187 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 KRT75O95678 551 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 GPX2P18283 190 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 TNNI3P19429 210 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 FOLR3P41439 243 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 MVDP53602 400 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 OR4D2P58180 307 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 RPS15P62841 145 aaKnown RBP16.87■□□□□ 0.29
CLPX-203ENST00000558958 PRR5P85299 388 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 DNASE1L3Q13609 305 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 C6orf120Q7Z4R8 191 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 SIMC1Q8NDZ2 872 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 NUP43Q8NFH3 380 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 OR56A1Q8NGH5 318 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 NXPE2Q96DL1 559 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 ZNF578Q96N58 590 aaPredicted RBP16.87■□□□□ 0.29
CLPX-203ENST00000558958 THTPAQ9BU02 230 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 ANKRA2Q9H9E1 313 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 GPATCH2Q9NW75 528 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 L3MBTL1Q9Y468 752 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 SPTBN2O15020 2390 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 SPTBN4Q9H254 2564 aa16.87■□□□□ 0.29
CLPX-203ENST00000558958 LOC101059948A0A1B0GTJ6 334 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 HRKO00198 91 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 CBX7O95931 251 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PGM1P36871 562 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 DLSTP36957 453 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 VAC14Q08AM6 782 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 FUT7Q11130 342 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 TP53BP2Q13625 1128 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 ZNF267Q14586 743 aaPredicted RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 SFT2D3Q587I9 215 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 ARHGAP24Q8N264 748 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 OR14A16Q8NHC5 309 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PNPT1Q8TCS8 783 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 DAZLQ92904 295 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 MCUR1Q96AQ8 359 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 MESP1Q9BRJ9 268 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 SCNM1Q9BWG6 230 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 KAT8Q9H7Z6 458 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 CORO2BQ9UQ03 480 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 AP3M1Q9Y2T2 418 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 CLCA3PQ9Y6N3 262 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PCDH17O14917 1159 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 DYRK3O43781 588 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PSMG1O95456 288 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 IGHEP01854 428 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 F8A1P23610 371 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PGDP52209 483 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 PRKAG1P54619 331 aa16.86■□□□□ 0.29
CLPX-203ENST00000558958 RPS18P62269 152 aaKnown RBP16.86■□□□□ 0.29
CLPX-203ENST00000558958 EXOSC7Q15024 291 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms