RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MOSPD1Q9UJG1 213 aa2.49□□□□□ -2.01
SPG11-206ENST00000558093 V9GYY5 206 aaPredicted RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 TDRD6O60522 2096 aaKnown RBP2.49□□□□□ -2.01
SPG11-206ENST00000558093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.49□□□□□ -2.01
SPG11-206ENST00000558093 CENPJQ9HC77 1338 aaPredicted RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 ZCCHC6Q5VYS8 1495 aaKnown RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 C13orf42A0A1B0GVH6 325 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ATP6AP2A0A1C7CYW4 349 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 KRT87PA6NCN2 255 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ZBTB14O43829 449 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 SMPD2O60906 423 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 PDGFBP01127 241 aaPredicted RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 TSPY4P0CV99 314 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TSPY10P0CW01 314 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TOP1P11387 765 aaKnown RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 GLRA1P23415 457 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 MAPK3P27361 379 aaPredicted RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 CCR4P51679 360 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TKTL1P51854 596 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ARFIP1P53367 373 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 YBEYP58557 167 aaPredicted RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 GBE1Q04446 702 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 LCP2Q13094 533 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 RPS6KA1Q15418 735 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CAVIN4Q5BKX8 364 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ZNF600Q6ZNG1 722 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 RUFY3Q7L099 469 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 GLRX5Q86SX6 157 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 SIAH3Q8IW03 269 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CCDC83Q8IWF9 413 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 UNC45BQ8IWX7 931 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 LRRC43Q8N309 656 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TMCO5AQ8N6Q1 288 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ZBTB44Q8NCP5 570 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TRPV3Q8NET8 790 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 OR52K2Q8NGK3 314 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 FBXO30Q8TB52 745 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 GOLGA5Q8TBA6 731 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 KRT35Q92764 455 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CYYR1Q96J86 154 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 VPS39Q96JC1 886 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CABS1Q96KC9 395 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TCEANC2Q96MN5 208 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 RBM14Q96PK6 669 aaKnown RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 SIGLEC12Q96PQ1 595 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 RANBP9Q96S59 729 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 SSX3Q99909 188 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 AGPAT1Q99943 283 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TMEM206Q9H813 350 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 ZNF275Q9NSD4 429 aaPredicted RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 DNAJB9Q9UBS3 223 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CLIP2Q9UDT6 1046 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 SEC14L4Q9UDX3 406 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 TEKT2Q9UIF3 430 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 RNF24Q9Y225 148 aa2.48□□□□□ -2.01
SPG11-206ENST00000558093 CFAP65Q6ZU64 1925 aaKnown RBP2.48□□□□□ -2.01
SPG11-206ENST00000558093 RGSL1A5PLK6 1076 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 H0YIG0 161 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 K7EPI3 171 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 M0QX08 132 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 UBXN8O00124 270 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 DDX39AO00148 427 aaKnown RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 AP3B1O00203 1094 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 CACNB4O00305 520 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 SLC33A1O00400 549 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 TNFSF11O14788 317 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 TTI1O43156 1089 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 RIPK2O43353 540 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 STX6O43752 255 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 NEMFO60524 1076 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 FMO6PO60774 539 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 TSC22D2O75157 780 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 RTN2O75298 545 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ADCY5O95622 1261 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 SLC16A8O95907 504 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 PAHP00439 452 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 MMP10P09238 476 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 TPBGLP0DKB5 382 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 PDHBP11177 359 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ZBTB25P24278 435 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 CHRNA3P32297 505 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 OR1D2P34982 312 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 DRD3P35462 400 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 MAGEA9P43362 315 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ATP5OP48047 213 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 SULT1E1P49888 294 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 SLC26A5P58743 744 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ST8SIA6P61647 398 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 MFGE8Q08431 387 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 MEF2DQ14814 521 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 HEPACAMQ14CZ8 416 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 P2RY14Q15391 338 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 PPP1R7Q15435 360 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 GSG1Q2KHT4 349 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 C17orf58Q2M2W7 97 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ANKRD20A4Q4UJ75 823 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 UNC50Q53HI1 259 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ANKRD20A8PQ5CZ79 823 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ANKRD20A2Q5SQ80 823 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ANKRD20A1Q5TYW2 823 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms