RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ASB5Q8WWX0 329 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 LMLNQ96KR4 655 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 C10orf90Q96M02 699 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CCNL2Q96S94 520 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 CHP1Q99653 195 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 C11orf70Q9BRQ4 267 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 CHRDL1Q9BU40 450 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ROPN1BQ9BZX4 212 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 IQCGQ9H095 443 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 POLR3FQ9H1D9 316 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 ZBTB20Q9HC78 741 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 NEK6Q9HC98 313 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 UBE2TQ9NPD8 197 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.39□□□□□ -1.87
TDP1-217ENST00000557782 UFSP2Q9NUQ7 469 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ZNHIT6Q9NWK9 470 aaKnown RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 SLC2A8Q9NY64 477 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ONECUT1Q9UBC0 465 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 WNT16Q9UBV4 365 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 ERRFI1Q9UJM3 462 aaPredicted RBP3.39□□□□□ -1.87
TDP1-217ENST00000557782 IKZF3Q9UKT9 509 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 SLC6A5Q9Y345 797 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 RNF115Q9Y4L5 304 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 WIPI2Q9Y4P8 454 aa3.39□□□□□ -1.87
TDP1-217ENST00000557782 LINC00854A0A1B0GVQ3 168 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 NKX6-3A6NJ46 265 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ZNF587BE7ETH6 402 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 C1QTNF3-AMACRE9PGA6 284 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 PRRG2O14669 202 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 MATN3O15232 486 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ATP6V0E1O15342 81 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 POLR2DO15514 142 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 CTSVO60911 334 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 DNAJB6O75190 326 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SAP30O75446 220 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 MTRF1O75570 445 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ANXA9O76027 345 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 FGF19O95750 216 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 FCER2P06734 321 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 FCGR1AP12314 374 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 TNFRSF1BP20333 461 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 NT5EP21589 574 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SGSHP51688 502 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 NDST1P52848 882 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SEC61GP60059 68 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 EIF3EP60228 445 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 MECOMQ03112 1051 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 Q0VFX4 171 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ELAVL3Q14576 367 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 SF3B4Q15427 424 aaKnown RBP eCLIP3.38□□□□□ -1.87
TDP1-217ENST00000557782 SYPL1Q16563 259 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 C3AR1Q16581 482 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ZNF260Q3ZCT1 412 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 HSP90B2PQ58FF3 399 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SIRPB2Q5JXA9 342 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 CTSL3PQ5NE16 218 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ZNF841Q6ZN19 808 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 BZW1Q7L1Q6 419 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 NET1Q7Z628 596 aaPredicted RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 PIM3Q86V86 326 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SATL1Q86VE3 508 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SPATA2LQ8IUW3 424 aaPredicted RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 WDR49Q8IV35 697 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 IQCF2Q8IXL9 164 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SRRM1Q8IYB3 904 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 LINC00518Q8N0U6 118 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 COMMD1Q8N668 190 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 CEP112Q8N8E3 955 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 NFAM1Q8NET5 270 aaPredicted RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 KCNG3Q8TAE7 436 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 PIGCQ92535 297 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 MYLPFQ96A32 169 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 PNPLA2Q96AD5 504 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 ZG16BQ96DA0 208 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 RTP4Q96DX8 246 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 C11orf24Q96F05 449 aaPredicted RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 LURAP1Q96LR2 239 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 TGM7Q96PF1 710 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 RIT2Q99578 217 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 LPAR4Q99677 370 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 CITED1Q99966 193 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 TRIM9Q9C026 710 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 SHARPINQ9H0F6 387 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 EHD1Q9H4M9 534 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 XKR8Q9H6D3 395 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 C3orf14Q9HBI5 128 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 POMT2Q9UKY4 750 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 MYO6Q9UM54 1294 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 KLHDC2Q9Y2U9 406 aa3.38□□□□□ -1.87
TDP1-217ENST00000557782 WDR33Q9C0J8 1336 aaKnown RBP3.38□□□□□ -1.87
TDP1-217ENST00000557782 ATP10DQ9P241 1426 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 IGLV5-45A0A087WSX0 123 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 A0A087WZ39 114 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 TRBV4-1A0A0J9YWV2 114 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 ESYT2A0FGR8 921 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SNTNA6NMZ2 147 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 SRRM4A7MD48 611 aaKnown RBP3.37□□□□□ -1.87
TDP1-217ENST00000557782 SNURFLB1AK76 121 aa3.37□□□□□ -1.87
TDP1-217ENST00000557782 HNRNPCL2B2RXH8 293 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms