RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	DNASE1	P24855	282 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	CASQ1	P31415	396 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SERPINB8	P50452	374 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	WNT3	P56703	355 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	PPP2R2A	P63151	447 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	CRYZ	Q08257	329 aa	Known RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	TRADD	Q15628	312 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	CEBPE	Q15744	281 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SEM1	Q6ZVN7	128 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	LACC1	Q8IV20	430 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	PRR22	Q8IZ63	422 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	ZNF441	Q8N8Z8	693 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	L3MBTL4	Q8NA19	623 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	RELL2	Q8NC24	303 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	WDR20	Q8TBZ3	569 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SPPL2A	Q8TCT8	520 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	NINJ1	Q92982	152 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	RNASE6	Q93091	150 aa	Known RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	HSPBAP1	Q96EW2	488 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	CDK15	Q96Q40	435 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	TIMP4	Q99727	224 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	FOXC2	Q99958	501 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	OR10A5	Q9H207	317 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	NOL11	Q9H8H0	719 aa	Known RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	RASSF1	Q9NS23	344 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	TEX10	Q9NXF1	929 aa	Predicted RBP	11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	AHSP	Q9NZD4	102 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	ST6GALNAC2	Q9UJ37	374 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	SLC6A5	Q9Y345	797 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	MTOR	P42345	2549 aa		11.71	□□□□□ -0.53
RDH11-211	ENST00000557726	MED12	Q93074	2177 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	KDM4E	B2RXH2	506 aa	Predicted RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	KRT38	O76015	456 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	KLK1	P06870	262 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	CT62	P0C5K7	136 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	CEACAM8	P31997	349 aa	Predicted RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	TIMP3	P35625	211 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	DEK	P35659	375 aa	Known RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	CDK9	P50750	372 aa	Known RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	XK	P51811	444 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FUT7	Q11130	342 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	IFT88	Q13099	833 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FLYWCH1	Q4VC44	716 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	CCNYL2	Q5T2Q4	361 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FRG2	Q64ET8	278 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	METTL2B	Q6P1Q9	378 aa	Known RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	ZDHHC24	Q6UX98	284 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	PAGE2	Q7Z2X7	111 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	NAXE	Q8NCW5	288 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FAM222B	Q8WU58	562 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	PHF21B	Q96EK2	531 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	DOCK7	Q96N67	2140 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	GNRHR2	Q96P88	292 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FRG2B	Q96QU4	278 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	TRIB1	Q96RU8	372 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	SECISBP2	Q96T21	854 aa	Known RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	ANGPTL4	Q9BY76	406 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	LIME1	Q9H400	295 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	METTL7A	Q9H8H3	244 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	ZNF358	Q9NW07	568 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	PLEKHA6	Q9Y2H5	1048 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	C15orf41	Q9Y2V0	281 aa		11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.7	□□□□□ -0.54
RDH11-211	ENST00000557726	ITPR3	Q14573	2671 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	KIAA1549	Q9HCM3	1950 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726		A6NNC1	897 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	OR7A17	O14581	309 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	GNB5	O14775	395 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	GUCY1B2	O75343	617 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	SEMA3D	O95025	777 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	HPN	P05981	417 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	CPM	P14384	443 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	POR	P16435	677 aa	Predicted RBP	11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	PHB	P35232	272 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	GCK	P35557	465 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	CASP3	P42574	277 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	AGFG1	P52594	562 aa	Known RBP	11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	DGKQ	P52824	942 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	MAPK12	P53778	367 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	NNAT	Q16517	81 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	EIPR1	Q53HC9	387 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	SGO1	Q5FBB7	561 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	VASN	Q6EMK4	673 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	CDC20B	Q86Y33	519 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	KIF18B	Q86Y91	864 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	TGIF2LY	Q8IUE0	185 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	ZNF615	Q8N8J6	731 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	OR7G1	Q8NGA0	311 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	OR52B6	Q8NGF0	335 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	OR1J4	Q8NGS1	313 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	ABTB1	Q969K4	478 aa	Predicted RBP	11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	ADIPOR1	Q96A54	375 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	GPR78	Q96P69	363 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	SH3GL2	Q99962	352 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	TMUB1	Q9BVT8	246 aa		11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	MRPL1	Q9BYD6	325 aa	Known RBP	11.69	□□□□□ -0.54
RDH11-211	ENST00000557726	BRINP2	Q9C0B6	783 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms