RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RILPQ96NA2 401 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 GPR78Q96P69 363 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 GNRHR2Q96P88 292 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 WDR41Q9HAD4 459 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 FOXD3Q9UJU5 478 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 CBLCQ9ULV8 474 aa14.6□□□□□ -0.07
SCFD1-224ENST00000557713 HRNRQ86YZ3 2850 aaPredicted RBP14.6□□□□□ -0.07
SCFD1-224ENST00000557713 IL2RAP01589 272 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GBAP04062 536 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GFAPP14136 432 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 STX2P32856 288 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 CASP3P42574 277 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 ZNF136P52737 540 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 CAV1Q03135 178 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GTF2H2Q13888 395 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 ACAP2Q15057 778 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 TRADDQ15628 312 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 NSUN5P2Q63ZY6 315 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 OR52E8Q6IFG1 317 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GTF2H2CQ6P1K8 395 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GOLGA7Q7Z5G4 137 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 CCDC91Q7Z6B0 441 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 PACS2Q86VP3 889 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GALNT12Q8IXK2 581 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 PM20D2Q8IYS1 436 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 GOT1L1Q8NHS2 421 aaPredicted RBP14.59□□□□□ -0.07
SCFD1-224ENST00000557713 FBXO25Q8TCJ0 367 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 OR10A5Q9H207 317 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 EPB41L4BQ9H329 900 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 TEX10Q9NXF1 929 aaPredicted RBP14.59□□□□□ -0.07
SCFD1-224ENST00000557713 MTRF1LQ9UGC7 380 aaKnown RBP14.59□□□□□ -0.07
SCFD1-224ENST00000557713 EDARQ9UNE0 448 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 PLEKHA6Q9Y2H5 1048 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 SLC6A5Q9Y345 797 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 NINQ8N4C6 2090 aa14.59□□□□□ -0.07
SCFD1-224ENST00000557713 NIPBLQ6KC79 2804 aaeCLIP14.58□□□□□ -0.08
SCFD1-224ENST00000557713 KLHL2O95198 593 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 SIX3O95343 332 aaPredicted RBP14.58□□□□□ -0.08
SCFD1-224ENST00000557713 CLDN9O95484 217 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 BMP7P18075 431 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 S1PR1P21453 382 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 PIK3R1P27986 724 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 PIK3CGP48736 1102 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 PPP2R2AP63151 447 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 SF3B4Q15427 424 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCFD1-224ENST00000557713 MROH9Q5TGP6 573 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 HLA-DQA1Q5Y7H0 255 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 METTL2BQ6P1Q9 378 aaKnown RBP14.58□□□□□ -0.08
SCFD1-224ENST00000557713 ZDHHC24Q6UX98 284 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 CCDC25Q86WR0 208 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 C17orf47Q8NEP4 570 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 OR4K14Q8NGD5 310 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 MBD6Q96DN6 1003 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 HSPBAP1Q96EW2 488 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 WDYHV1Q96HA8 205 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 TMEM41AQ96HV5 264 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 ALPK1Q96QP1 1244 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 SERPINI1Q99574 410 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 UGT2B28Q9BY64 529 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 GRPEL1Q9HAV7 217 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 DLL4Q9NR61 685 aa14.58□□□□□ -0.08
SCFD1-224ENST00000557713 TNPO3Q9Y5L0 923 aaKnown RBP14.58□□□□□ -0.08
SCFD1-224ENST00000557713 MBD3L4A6NDZ8 208 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 MBD3L3A6NE82 208 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 MBD3L5A6NJ08 208 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 CD8B2A6NJW9 211 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 OR7A17O14581 309 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 SEMA3DO95025 777 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 ABCB1P08183 1280 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 EPXP11678 715 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 TACR1P25103 407 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 TMED10P49755 219 aaKnown RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 XKP51811 444 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 NRG3P56975 720 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 RPP38P78345 283 aaKnown RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 FOXD4Q12950 439 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 EIPR1Q53HC9 387 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 DCST1Q5T197 706 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 TIGD3Q6B0B8 471 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 CAMKMTQ7Z624 323 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 PRR22Q8IZ63 422 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 OR7G1Q8NGA0 311 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 MBD3L2Q8NHZ7 208 aaPredicted RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 CDK15Q96Q40 435 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 NOL11Q9H8H0 719 aaKnown RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 JKAMPQ9P055 326 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 FETUBQ9UGM5 382 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 CAMK2AQ9UQM7 478 aa14.57□□□□□ -0.08
SCFD1-224ENST00000557713 UTP11Q9Y3A2 253 aaKnown RBP14.57□□□□□ -0.08
SCFD1-224ENST00000557713 A0A096LPK6 155 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 KLK1P06870 262 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 CPMP14384 443 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 FOSL1P15407 271 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 NAGAP17050 411 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 GPX3P22352 226 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 CTSSP25774 331 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 ABCD3P28288 659 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 PTPN6P29350 595 aa14.56□□□□□ -0.08
SCFD1-224ENST00000557713 MASP1P48740 699 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms