RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 LSM3P62310 102 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ABATP80404 500 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 TGM3Q08188 693 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ELAVL3Q14576 367 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SPHARQ15513 63 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 BCL2A1Q16548 175 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SMN1Q16637 294 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SYT16Q17RD7 645 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SLC5A12Q1EHB4 618 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 FAM46CQ5VWP2 391 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 KHDRBS2Q5VWX1 349 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 C12orf73Q69YU5 71 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ZNF770Q6IQ21 691 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 METAP1DQ6UB28 335 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 FAM83HQ6ZRV2 1179 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 TRMT11Q7Z4G4 463 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CCDC190Q86UF4 302 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 FAM129CQ86XR2 697 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 LRRC56Q8IYG6 542 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SAMD14Q8IZD0 417 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CADM3Q8N126 398 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 FAM26EQ8N5C1 309 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 PARP16Q8N5Y8 322 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 GDPD1Q8N9F7 314 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 B3GNT7Q8NFL0 401 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 GPR156Q8NFN8 814 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 RFKQ969G6 155 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CLDN23Q96B33 292 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 OTUB1Q96FW1 271 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 MED18Q9BUE0 208 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CDADC1Q9BWV3 514 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 TAPBPLQ9BX59 468 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 POLDIP3Q9BY77 421 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 POLR2J2Q9GZM3 115 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 POLR2J3Q9H1A7 115 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SMOC1Q9H4F8 434 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 RMI1Q9H9A7 625 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CACYBPQ9HB71 228 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SLC25A19Q9HC21 320 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 KRCC1Q9NPI7 259 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CD84Q9UIB8 345 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 CLEC4EQ9ULY5 219 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 EXO1Q9UQ84 846 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 ERVK-11Q9UQG0 969 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 LIPT1Q9Y234 373 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 KLHL20Q9Y2M5 609 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 GSTK1Q9Y2Q3 226 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 EXOSC1Q9Y3B2 195 aaKnown RBP6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SDK1Q7Z5N4 2213 aa6.9□□□□□ -1.3
MTHFD1-215ENST00000557370 SPTA1P02549 2419 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 A0A0G2JPF8 293 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 HTR3EA5X5Y0 456 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 SHISA7A6NL88 538 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 HNRNPCL2B2RXH8 293 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 HNRNPCL3B7ZW38 293 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 ZNF670-ZNF695F2Z2N8 137 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 MYL12BO14950 172 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 YY2O15391 372 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 CHST10O43529 356 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 HRO43593 1189 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 KIAA0513O60268 411 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 TRIM3O75382 744 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 POP7O75817 140 aaKnown RBP6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 SOX30O94993 753 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 MFN2O95140 757 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 ETHE1O95571 254 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 NFATC1O95644 943 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 RAB36O95755 333 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 DLGAP3O95886 979 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 TGFB1P01137 390 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 VIPP01282 170 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 KLK1P06870 262 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 IL3P08700 152 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 NUDT7P0C024 238 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 HNRNPCL4P0DMR1 293 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 CKMT1AP12532 417 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 MYL12AP19105 171 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 NR4A1P22736 598 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 AQP1P29972 269 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 C21orf33P30042 268 aaPredicted RBP6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 NTSP30990 170 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 MPLP40238 635 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 SLC19A1P41440 591 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 BDKRB1P46663 353 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 PREPP48147 710 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 XKP51811 444 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 SMSP52788 366 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 CTSCP53634 463 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 CRISP3P54108 245 aa6.89□□□□□ -1.31
MTHFD1-215ENST00000557370 REEP5Q00765 189 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms