RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 C6orf52Q5T4I8 152 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ICE2Q659A1 982 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 NIPAL1Q6NVV3 410 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 C12orf54Q6X4T0 127 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 RTL4Q6ZR62 310 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 QSOX2Q6ZRP7 698 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 DNM1P46Q6ZS02 220 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 VN1R4Q7Z5H5 301 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CAND1Q86VP6 1230 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PDSS2Q86YH6 399 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 RASGEF1CQ8N431 466 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 AFAP1L2Q8N4X5 818 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF441Q8N8Z8 693 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 CAMKVQ8NCB2 501 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 B3GNT7Q8NFL0 401 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 OR10H5Q8NGA6 315 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 OR9A1PQ8NGU1 263 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 MBD3L2Q8NHZ7 208 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 GSDMBQ8TAX9 411 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 STYXQ8WUJ0 223 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ZMYND19Q96E35 227 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PIK3IP1Q96FE7 263 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ART5Q96L15 291 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 FOPNLQ96NB1 174 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ZFP3Q96NJ6 502 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PRAP1Q96NZ9 151 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 WDR83Q9BRX9 315 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 SFXN3Q9BWM7 321 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 TSSK1BQ9BXA7 367 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 ANGPTL4Q9BY76 406 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 SHARPINQ9H0F6 387 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PIGMQ9H3S5 423 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 SACM1LQ9NTJ5 587 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 TMEM184CQ9NVA4 438 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 TRMT1Q9NXH9 659 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 PSD3Q9NYI0 1048 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 H2AFY2Q9P0M6 372 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 RSPH14Q9UHP6 348 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 MAPRE3Q9UPY8 281 aa4.29□□□□□ -1.72
SCFD1-223ENST00000557076 BZW2Q9Y6E2 419 aaKnown RBP4.29□□□□□ -1.72
SCFD1-223ENST00000557076 A0A0G2JMM0 328 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 A0A1W2PPB8 328 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 A0A1W2PRS3 328 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LRRC14BA6NHZ5 514 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 IQCF5A8MTL0 148 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 KIR3DP1A8MWS1 328 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 HACD1B0YJ81 288 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 KDM4EB2RXH2 506 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 G3V3Y1 287 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 HAT1O14929 419 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 CHST10O43529 356 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 B4GALT2O60909 372 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 RDH16O75452 317 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 OR6B1O95007 311 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ESRRBO95718 433 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 C1QAP02745 245 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 P04436 131 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LTA4HP09960 611 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 IL1RNP18510 177 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 CHRM3P20309 590 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LOXP28300 417 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 GJC1P36383 396 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 PPARGP37231 505 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 DIO3P55073 304 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 MTTPP55157 894 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 RPS15AP62244 130 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 SKP1P63208 163 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 OCRLQ01968 901 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 CRYZQ08257 329 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 MGAT5Q09328 741 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 FOXI1Q12951 378 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 GAB1Q13480 694 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 VEZF1Q14119 521 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 TFDP2Q14188 446 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 PDCD2Q16342 344 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 DPCR1Q3MIW9 517 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ANKRD20A4Q4UJ75 823 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 NHSL2Q5HYW2 709 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ANKRD20A2Q5SQ80 823 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ANKRD20A1Q5TYW2 823 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LRRC38Q5VT99 294 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ANKRD20A3Q5VUR7 823 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 SLC22A10Q63ZE4 541 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 FAM47EQ6ZV65 393 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 MEX3DQ86XN8 651 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 RFX6Q8HWS3 928 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 LRRC25Q8N386 305 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ZNF611Q8N823 705 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ZPLD1Q8TCW7 415 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 SLC13A3Q8WWT9 602 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 TRMT61AQ96FX7 289 aaKnown RBP4.28□□□□□ -1.72
SCFD1-223ENST00000557076 VMP1Q96GC9 406 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 CCDC138Q96M89 665 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 QRFPRQ96P65 431 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 ALS2CR12Q96Q35 445 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 PANX2Q96RD6 677 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 RASL10BQ96S79 203 aa4.28□□□□□ -1.72
SCFD1-223ENST00000557076 MACROD1Q9BQ69 325 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms