RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ZNF460Q14592 562 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TMEM35AQ53FP2 167 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
ACTN1-219ENST00000556432 CFAP36Q96G28 342 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TMEM41AQ96HV5 264 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 MS4A8Q9BY19 250 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 SERHLQ9NQF3 203 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 MS4A12Q9NXJ0 267 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 PHF11Q9UIL8 331 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 MAPRE3Q9UPY8 281 aa12.66□□□□□ -0.38
ACTN1-219ENST00000556432 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 PRAMEF4O60810 478 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 CDH16O75309 829 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 TNFSF13O75888 250 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 POU2F1P14859 743 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 CHMP24386 653 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 SSTR4P31391 388 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 UGT2B10P36537 528 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 BUD31P41223 144 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-219ENST00000556432 HSPA7P48741 367 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 IRF8Q02556 426 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 LAPTM5Q13571 262 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 PDK4Q16654 411 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 TEDDM1Q5T9Z0 273 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 PRAMEF9Q5VWM5 478 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 C18orf63Q68DL7 685 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 GPR180Q86V85 440 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 IFNEQ86WN2 208 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 TMEM139Q8IV31 216 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 TRIM42Q8IWZ5 723 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 PPIL6Q8IXY8 311 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 ANKRD7Q92527 254 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 SLC39A3Q9BRY0 314 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
ACTN1-219ENST00000556432 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 PLOD2O00469 737 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 PHF1O43189 567 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-219ENST00000556432 SCELO95171 688 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 CD22P20273 847 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 TCEA1P23193 301 aaKnown RBP12.64□□□□□ -0.39
ACTN1-219ENST00000556432 STARP49675 285 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 SIRPAP78324 504 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 CHIT1Q13231 466 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 DDX39BQ13838 428 aaKnown RBP12.64□□□□□ -0.39
ACTN1-219ENST00000556432 C6orf163Q5TEZ5 329 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 OR4C11Q6IEV9 310 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 TCAIMQ8N3R3 496 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
ACTN1-219ENST00000556432 TP53INP1Q96A56 240 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 PGM2Q96G03 612 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 CENPKQ9BS16 269 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 TMEM79Q9BSE2 394 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 OSBPL11Q9BXB4 747 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 OPN3Q9H1Y3 402 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-219ENST00000556432 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 ACTR8Q9H981 624 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 GALNT9Q9HCQ5 603 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 FETUBQ9UGM5 382 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 ABCA1O95477 2261 aa12.64□□□□□ -0.39
ACTN1-219ENST00000556432 FAM95CA0A1B0GW59 222 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 C16orf97H3BN30 126 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CCNT2O60583 730 aaKnown RBP12.63□□□□□ -0.39
ACTN1-219ENST00000556432 STK16O75716 305 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 GPR75O95800 540 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CLPSP04118 112 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 NR2F6P10588 404 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 EPB42P16452 691 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 ABCD3P28288 659 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CCKARP32238 428 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 HNRNPH2P55795 449 aaKnown RBP12.63□□□□□ -0.39
ACTN1-219ENST00000556432 TGFBIQ15582 683 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 NNATQ16517 81 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CLEC12BQ2HXU8 276 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CHRFAM7AQ494W8 412 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 HP1BP3Q5SSJ5 553 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-219ENST00000556432 KHDRBS2Q5VWX1 349 aaKnown RBP12.63□□□□□ -0.39
ACTN1-219ENST00000556432 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 AAGABQ6PD74 315 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 BTLAQ7Z6A9 289 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 ADGRE4PQ86SQ3 457 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 GPSM1Q86YR5 675 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 UBE2E3Q969T4 207 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 STARD4Q96DR4 205 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 CMTM7Q96FZ5 175 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 SFXN2Q96NB2 322 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 UCN2Q96RP3 112 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 NAT9Q9BTE0 207 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 G6PC3Q9BUM1 346 aa12.63□□□□□ -0.39
ACTN1-219ENST00000556432 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms