RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 GPR180Q86V85 440 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF595Q8IYB9 648 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 BEST3Q8N1M1 668 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 SLC5A8Q8N695 610 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 TMEM52Q8NDY8 209 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 CATSPER1Q8NEC5 780 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 NFAM1Q8NET5 270 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-215ENST00000555616 CLHC1Q8NHS4 586 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 ELP5Q8TE02 316 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 GRHL3Q8TE85 626 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 C16orf78Q8WTQ4 265 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 TESCQ96BS2 214 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 MTERF3Q96E29 417 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF354BQ96LW1 612 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 NPAS2Q99743 824 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 SLX1AQ9BQ83 275 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 WDR41Q9HAD4 459 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 LYRM4Q9HD34 91 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 CCDC167Q9P0B6 97 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 BAIAP2L1Q9UHR4 511 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 DAPP1Q9UN19 280 aa8.98□□□□□ -0.97
ACTN1-215ENST00000555616 PPIEQ9UNP9 301 aaKnown RBP8.98□□□□□ -0.97
ACTN1-215ENST00000555616 MRPS33Q9Y291 106 aaKnown RBP8.98□□□□□ -0.97
ACTN1-215ENST00000555616 ANKUB1A6NFN9 424 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CYSRT1A8MQ03 144 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 A8MUI8 341 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CAPN14A8MX76 684 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 NR5A2O00482 541 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CLDN4O14493 209 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ANKRD28O15084 1053 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ANGPT2O15123 496 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 SCAMP2O15127 329 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 AKAP10O43572 662 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TMPRSS11DO60235 418 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PRAMEF2O60811 474 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 UBOX5O94941 541 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 LRATO95237 230 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 F10P00742 488 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 IL6P05231 212 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 IL3P08700 152 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 COX7A2P14406 83 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 HNRNPFP52597 415 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 LIM2P55344 173 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 SRSF11Q05519 484 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ACTN3Q08043 901 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 C2orf80Q0P641 193 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 BNIP1Q12981 228 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 STX5Q13190 355 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TUBA3CQ13748 450 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CYLC2Q14093 348 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 RCAN2Q14206 197 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 FHL5Q5TD97 284 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 NDUFAF5Q5TEU4 345 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF324BQ6AW86 544 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 FCRLBQ6BAA4 426 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 MRM1Q6IN84 353 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TUBA3EQ6PEY2 450 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 KIF2BQ8N4N8 673 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 KRTCAP2Q8N6L1 136 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 FAM47BQ8NA70 645 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ST6GALNAC3Q8NDV1 305 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 MDS2Q8NDY4 140 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 OR9I1Q8NGQ6 314 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 OR1N1Q8NGS0 311 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 RP9Q8TA86 221 aaKnown RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TSPEARQ8WU66 669 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 FAR1Q8WVX9 515 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PPCDCQ96CD2 204 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TM4SF18Q96CE8 201 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF764Q96H86 408 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TAAR6Q96RI8 345 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CSF3RQ99062 836 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.97□□□□□ -0.972e-6■■□□□ 14.2
ACTN1-215ENST00000555616 REEP4Q9H6H4 257 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PRTFDC1Q9NRG1 225 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ATAD3AQ9NVI7 634 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 STMN3Q9NZ72 180 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 EHD3Q9NZN3 535 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 KCMF1Q9P0J7 381 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 ABI3Q9P2A4 366 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 TAGLN3Q9UI15 199 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 FBXW2Q9UKT8 454 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 PCDHGB6Q9Y5F9 930 aa8.97□□□□□ -0.97
ACTN1-215ENST00000555616 C1orf226A1L170 272 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 BLACEA4D250 179 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 CCDC154A6NI56 674 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 BBIP1A8MTZ0 92 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 CFLARO15519 480 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 PROM1O43490 865 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 MAN1A2O60476 641 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 HNRNPCL1O60812 293 aaKnown RBP8.96□□□□□ -0.98
ACTN1-215ENST00000555616 NR2F6P10588 404 aa8.96□□□□□ -0.98
ACTN1-215ENST00000555616 ESRRAP11474 423 aaPredicted RBP8.96□□□□□ -0.98
ACTN1-215ENST00000555616 COX4I1P13073 169 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms