RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SLC6A16Q9GZN6 736 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TFB2MQ9H5Q4 396 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 HCN4Q9Y3Q4 1203 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CEBPZOSA8MTT3 80 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 M0QX08 132 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF821O75541 412 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AGTR1P30556 359 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GKP32189 559 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 FGL1Q08830 312 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CNPY1Q3B7I2 92 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 FBXO43Q4G163 708 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AGAP7PQ5VUJ5 663 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AGAP6Q5VW22 663 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 PLCXD3Q63HM9 321 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 IL20RBQ6UXL0 311 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ST7LQ8TDW4 575 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 HAS1Q92839 578 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AGAP4Q96P64 663 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ACSL6Q9UKU0 697 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 F5H5K5 113 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 NUDT21O43809 227 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AMY2AP04746 511 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CRHBPP24387 322 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 HES1Q14469 280 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 KCTD18Q6PI47 426 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 PSD4Q8NDX1 1056 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 INTS12Q96CB8 462 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 DPCDQ9BVM2 203 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 MAB21L2Q9Y586 359 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TCRBV7S2A1N4TA0A589 114 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 YJEFN3A6XGL0 299 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AGPAT2O15120 278 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OPN1LWP04000 364 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SYPP08247 313 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TIMP2P16035 220 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 F2RP25116 425 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 LILRA4P59901 499 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 RAB5BP61020 215 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 PEX11GQ96HA9 241 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 NXF5Q9H1B4 397 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ST14Q9Y5Y6 855 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CD300LBA8K4G0 201 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CBX7O95931 251 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 POU3F2P20265 443 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 HTR2AP28223 471 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GINS1Q14691 196 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 DEFB134Q4QY38 66 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SPRYD7Q5W111 196 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OR9A1PQ8NGU1 263 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OR4K15Q8NH41 348 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GATA5Q9BWX5 397 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CACNA1BQ00975 2339 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ALDOBP05062 364 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GDF5P43026 501 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 DMWDQ09019 674 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF718Q3SXZ3 478 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 C6orf132Q5T0Z8 1188 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GPRC6AQ5T6X5 926 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 C9orf135Q5VTT2 229 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SPTSSAQ969W0 71 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 OR5B2Q96R09 309 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ITPAQ9BY32 194 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CNTN6Q9UQ52 1028 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ASB3Q9Y575 518 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 PCDH17O14917 1159 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 APOC3P02656 99 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CFHP08603 1231 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 CHATP28329 748 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 GPR4P46093 362 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 IDH3GP51553 393 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-216ENST00000555002 P2RX1P51575 399 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 SLAMF1Q13291 335 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 PON2Q15165 354 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 FAM110CQ1W6H9 321 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM59Q9BXS4 323 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF160Q9HCG1 818 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 RAB9BQ9NP90 201 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 C14orf119Q9NWQ9 140 aa6.59□□□□□ -1.35
SYNE2-216ENST00000555002 IGLON5A6NGN9 336 aa6.59□□□□□ -1.36
SYNE2-216ENST00000555002 ANKRD30BLA7E2S9 258 aa6.59□□□□□ -1.36
SYNE2-216ENST00000555002 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.36
SYNE2-216ENST00000555002 HEPHL1Q6MZM0 1159 aa6.59□□□□□ -1.36
SYNE2-216ENST00000555002 LRFN4Q6PJG9 635 aa6.59□□□□□ -1.36
SYNE2-216ENST00000555002 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 H3BML4 177 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 GABRDO14764 452 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SIX3O95343 332 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 SCGB1D1O95968 90 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RNH1P13489 461 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 TGM1P22735 817 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 NR4A2P43354 598 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 KCNQ1P51787 676 aa6.58□□□□□ -1.36
SYNE2-216ENST00000555002 RPS21P63220 83 aaKnown RBP6.58□□□□□ -1.36
SYNE2-216ENST00000555002 MZT1Q08AG7 82 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms