RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 KLRC3Q07444 240 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CETN1Q12798 172 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ABRQ12979 859 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CDH18Q13634 790 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 RCN2Q14257 317 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TMEM132DQ14C87 1099 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 MORF4L2Q15014 288 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 EFTUD2Q15029 972 aaKnown RBP eCLIP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF674Q2M3X9 581 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SMU1Q2TAY7 513 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ODF2Q5BJF6 829 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF789Q5FWF6 425 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FGD3Q5JSP0 725 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ADAMTSL4-AS1Q5T5F5 129 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 OR4C11Q6IEV9 310 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF770Q6IQ21 691 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NHLRC1Q6VVB1 395 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 Q6ZSR9 355 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NOTCH2NLQ7Z3S9 236 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SIAH3Q8IW03 269 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C10orf53Q8N6V4 93 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF248Q8NDW4 579 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 OR6S1Q8NH40 331 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 MAPK15Q8TD08 544 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 HCAR2Q8TDS4 363 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SMAP2Q8WU79 429 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 GATAD1Q8WUU5 269 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNRF4Q8WWF5 429 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PIBF1Q8WXW3 757 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ING5Q8WYH8 240 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SNRNP40Q96DI7 357 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NXPE2Q96DL1 559 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C17orf62Q9BQA9 187 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 RPP25Q9BUL9 199 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CLEC7AQ9BXN2 247 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 BARHL1Q9BZE3 327 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 WDR13Q9H1Z4 485 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 RPF1Q9H9Y2 349 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FGF22Q9HCT0 170 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 IL1RAPL2Q9NP60 686 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 HEBP1Q9NRV9 189 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PLCXD1Q9NUJ7 323 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 EXOC1Q9NV70 894 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PANK4Q9NVE7 773 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CYP39A1Q9NYL5 469 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CNIH4Q9P003 139 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 HACD3Q9P035 362 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FBXL4Q9UKA2 621 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PILRBQ9UKJ0 227 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DUSP12Q9UNI6 340 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 GPR132Q9UNW8 380 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ITM2BQ9Y287 266 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NCKAP1Q9Y2A7 1128 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NSG2Q9Y328 171 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PYGO1Q9Y3Y4 419 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PCDHGA1Q9Y5H4 931 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SELENOKQ9Y6D0 94 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 COLEC10Q9Y6Z7 277 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TDRD15B5MCY1 1934 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 NAV3Q8IVL0 2385 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZNF532Q9HCE3 1301 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 MUC22E2RYF6 1773 aaPredicted RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 MYH9P35579 1960 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DOCK9Q9BZ29 2069 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SDK2Q58EX2 2172 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C13orf42A0A1B0GVH6 325 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SPAARA0A1B0GVQ0 90 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 A0A1W2PR80 420 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ANTXRLA6NF34 631 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ASB14A6NK59 587 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SHISA7A6NL88 538 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 C15orf61A6NNL5 157 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PGRMC2O15173 223 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SCO2O43819 266 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 KIF5CO60282 957 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CYTIPO60759 359 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ATP9AO75110 1047 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 CXCL10P02778 98 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 GOLGA8HP0CJ92 632 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 KRT3P12035 628 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 GOT1P17174 413 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 AADACP22760 399 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 OAS2P29728 719 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SOX3P41225 446 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 OR3A2P47893 321 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 XGP55808 180 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 OR1D5P58170 312 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 RPS6P62753 249 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ARHGAP1Q07960 439 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 SRSF9Q13242 221 aaKnown RBP eCLIP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TMEM187Q14656 261 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 PPA1Q15181 289 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 TAB1Q15750 504 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DUSP5Q16690 384 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FUT11Q495W5 492 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 ZFP69Q49AA0 526 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 KLHL10Q6JEL2 608 aa1.31□□□□□ -2.2
PRPF39-208ENST00000554785 FIP1L1Q6UN15 594 aaKnown RBP1.31□□□□□ -2.2
PRPF39-208ENST00000554785 DHRS11Q6UWP2 260 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms