RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SH2D2AQ9NP31 389 aa7.46□□□□□ -1.22
ACTN1-212ENST00000554158 TEX10Q9NXF1 929 aaPredicted RBP7.46□□□□□ -1.22
ACTN1-212ENST00000554158 GALNT8Q9NY28 637 aa7.46□□□□□ -1.22
ACTN1-212ENST00000554158 CNOT11Q9UKZ1 510 aaKnown RBP7.46□□□□□ -1.22
ACTN1-212ENST00000554158 RNF112Q9ULX5 631 aa7.46□□□□□ -1.22
ACTN1-212ENST00000554158 CHCHD2Q9Y6H1 151 aaPredicted RBP7.46□□□□□ -1.22
ACTN1-212ENST00000554158 MBD3L4A6NDZ8 208 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 MBD3L3A6NE82 208 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SAP18O00422 153 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 GNB5O14775 395 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SIAH2O43255 324 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SMNDC1O75940 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 GPR75O95800 540 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 HRGP04196 525 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 IGKV3-11P04433 115 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 RPLP1P05386 114 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 HPNP05981 417 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 CCDC166P0CW27 439 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 NR2F6P10588 404 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 PIK3R1P27986 724 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ARL1P40616 181 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 KCNJ5P48544 419 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 FBXW4P57775 412 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 TAS2R39P59534 338 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ATP6V0D1P61421 351 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 RPS13P62277 151 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 POU4F1Q01851 419 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SRYQ05066 204 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 MORF4L2Q15014 288 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 TBCCQ15814 346 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 CYP1B1Q16678 543 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 CDKL4Q5MAI5 379 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 WIPI1Q5MNZ9 446 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 KHDRBS2Q5VWX1 349 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 AAGABQ6PD74 315 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 PRSS57Q6UWY2 283 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ANGPTL8Q6UXH0 198 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZNF793Q6ZN11 406 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZNF662Q6ZS27 426 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 LRRC70Q7Z2Q7 622 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 VN1R5Q7Z5H4 357 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZC3HC1Q86WB0 502 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 GRAMD2AQ8IUY3 354 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZNF441Q8N8Z8 693 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SPATA3Q8NHX4 192 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 MBD3L2Q8NHZ7 208 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZPLD1Q8TCW7 415 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 CDKL2Q92772 493 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 TP53INP1Q96A56 240 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 INTS12Q96CB8 462 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 NTNG2Q96CW9 530 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 REPS1Q96D71 796 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 PERPQ96FX8 193 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 COX4I2Q96KJ9 171 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 GNRHR2Q96P88 292 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 FAM111AQ96PZ2 611 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 PIP5K1AQ99755 562 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 MED18Q9BUE0 208 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 UGT2B28Q9BY64 529 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 LYARQ9NX58 379 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 TRMT1Q9NXH9 659 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 KLRF1Q9NZS2 232 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 OPTCQ9UBM4 332 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 IKZF3Q9UKT9 509 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 ZNF490Q9ULM2 529 aaPredicted RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 C15orf41Q9Y2V0 281 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 JRKLQ9Y4A0 524 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 NPFFR2Q9Y5X5 522 aa7.45□□□□□ -1.22
ACTN1-212ENST00000554158 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
ACTN1-212ENST00000554158 SUPT3HB4E1H0 165 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 TRIM3O75382 744 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 SUPT3HO75486 399 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 SCELO95171 688 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 STMN1P16949 149 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 NT5EP21589 574 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 CHMP24386 653 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 GGT5P36269 586 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 SLC37A1P57057 533 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 IGLV3-21P80748 117 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 EBPQ15125 230 aaKnown RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 EIPR1Q53HC9 387 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 FBXO48Q5FWF7 155 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 NHSL2Q5HYW2 709 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 C18orf63Q68DL7 685 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 TIGD3Q6B0B8 471 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 ADNP2Q6IQ32 1131 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 TRMT10BQ6PF06 316 aaKnown RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 C20orf204Q6ZNR8 217 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 RAPH1Q70E73 1250 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 CXXC5Q7LFL8 322 aaKnown RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 YRDCQ86U90 279 aaKnown RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 IFNEQ86WN2 208 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 CNEP1R1Q8N9A8 125 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 C9orf106Q8NAJ2 232 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 FAM83FQ8NEG4 500 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-212ENST00000554158 SPPL2AQ8TCT8 520 aa7.44□□□□□ -1.22
ACTN1-212ENST00000554158 DOK4Q8TEW6 326 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms