RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCND2P30279 289 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 GSK3BP49841 420 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 SGSHP51688 502 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 NAAAQ02083 359 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 CD300CQ08708 224 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 NME3Q13232 169 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 GLIPR1L2Q4G1C9 344 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 TCHHL1Q5QJ38 904 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 CWC27Q6UX04 472 aaKnown RBP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 UNC5DQ6UXZ4 953 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 DPY19L2P2Q6ZN68 376 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 RNF130Q86XS8 419 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 PHC2Q8IXK0 858 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 MLKLQ8NB16 471 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ANKRD20A12PQ8NF67 263 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 NPRL2Q8WTW4 380 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 TAF15Q92804 592 aaKnown RBP eCLIP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 TBC1D31Q96DN5 1066 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF597Q96LX8 424 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ANKRD27Q96NW4 1050 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ATF6BQ99941 703 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 CABLES2Q9BTV7 478 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 NDUFAF3Q9BU61 184 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ST6GALNAC5Q9BVH7 336 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 TUBB1Q9H4B7 451 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 ROPN1Q9HAT0 212 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 IKZF3Q9UKT9 509 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.19□□□□□ -1.74
SYNE2-210ENST00000553455 FBXO7Q9Y3I1 522 aa4.19□□□□□ -1.74
SYNE2-210ENST00000553455 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 A0A1W2PPR1 153 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 BCLAF3A2AJT9 711 aaKnown RBP4.18□□□□□ -1.74
SYNE2-210ENST00000553455 PDHXO00330 501 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 BUB1O43683 1085 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 STK17BO94768 372 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 IGHG3P01860 377 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 RALAP11233 206 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 GP9P14770 177 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 OXTRP30559 389 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 CAPGP40121 348 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 PAX8Q06710 450 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 EMC2Q15006 297 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 LRIT3Q3SXY7 679 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 ACSF3Q4G176 576 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-210ENST00000553455 ERC1Q8IUD2 1116 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF491Q8N8L2 437 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 CPXM1Q96SM3 734 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 VGLL1Q99990 258 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 TRIM51Q9BSJ1 452 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 CHCHD5Q9BSY4 110 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 CCSER1Q9C0I3 900 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 EIF3KQ9UBQ5 218 aaKnown RBP4.18□□□□□ -1.74
SYNE2-210ENST00000553455 RARRES3Q9UL19 164 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 AFF2P51816 1311 aa4.18□□□□□ -1.74
SYNE2-210ENST00000553455 IGHV3-16A0A0C4DH30 117 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 LANCL1O43813 399 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 AKR7A3O95154 331 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 SEMA4FO95754 770 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 LMO2P25791 158 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 MATKP42679 507 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 SLC1A4P43007 532 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 RIDAP52758 137 aaKnown RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 DPYSQ14117 519 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 INAQ16352 499 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 TTC31Q49AM3 519 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF343Q6P1L6 599 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 GSG1LQ6UXU4 331 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ADCK1Q86TW2 530 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF440Q8IYI8 595 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 PYROXD2Q8N2H3 581 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 SAMD12Q8N8I0 201 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 OR52B4Q8NGK2 314 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 TAF4BQ92750 862 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 MCHR2Q969V1 340 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 NCLNQ969V3 563 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 NTNG2Q96CW9 530 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 HSD17B14Q9BPX1 270 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 RBM4BQ9BQ04 359 aaKnown RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 RAB11FIP5Q9BXF6 653 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 NACA2Q9H009 215 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ECT2Q9H8V3 914 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ACTR8Q9H981 624 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 LIN28AQ9H9Z2 209 aaKnown RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 BCAP29Q9UHQ4 241 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ZNF490Q9ULM2 529 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ISY1Q9ULR0 285 aaKnown RBP4.17□□□□□ -1.74
SYNE2-210ENST00000553455 ATP8B3O60423 1300 aa4.17□□□□□ -1.74
SYNE2-210ENST00000553455 PCNX3Q9H6A9 2034 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 RNF212BA8MTL3 300 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 F8WDY8 70 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 PI15O43692 258 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 UCP1P25874 307 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 PCK2Q16822 640 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 SHROOM1Q2M3G4 852 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-210ENST00000553455 C9orf66Q5T8R8 295 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 AGAP7PQ5VUJ5 663 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 PAQR6Q6TCH4 344 aa4.16□□□□□ -1.74
SYNE2-210ENST00000553455 ATRAIDQ6UW56 229 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms