RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LOC102723532A0A0G2JNH3 316 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 A0A0J9YY10 115 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 H3BMM5 538 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 GFYI3L273 518 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PGRMC1O00264 195 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 DNALI1O14645 258 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 RASGRF2O14827 1237 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 POLR1CO15160 346 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PRPF4O43172 522 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ALOX12BO75342 701 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SORBS2O94875 1100 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SEC31AO94979 1220 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ZBTB11O95625 1053 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ALPLP05186 524 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PRKAR1AP10644 381 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 MLNP12872 115 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 OGNP20774 298 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 IMPA1P29218 277 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ATP5DP30049 168 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 DLSTP36957 453 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SKIV2L2P42285 1042 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 HALP42357 657 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 RPL21P46778 160 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 FNTAP49354 379 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PMS2P54278 862 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SLC37A1P57057 533 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 BASP1P80723 227 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PDE1BQ01064 536 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 Q0VFX4 171 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CUL1Q13616 776 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 IL11RAQ14626 422 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PHKG1Q16816 387 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PPP1R3AQ16821 1122 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SLC5A12Q1EHB4 618 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PRTGQ2VWP7 1150 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ODF2Q5BJF6 829 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF470Q6ECI4 717 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CCDC70Q6NSX1 233 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CCDC137Q6PK04 289 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 UNC5DQ6UXZ4 953 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 C9orf47Q6ZRZ4 202 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 TAS2R42Q7RTR8 314 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PIWIL4Q7Z3Z4 852 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 AMIGO1Q86WK6 493 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PAQR7Q86WK9 346 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 OOSP2Q86WS3 158 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 DCUN1D3Q8IWE4 304 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SYTL1Q8IYJ3 562 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 OR4N4Q8N0Y3 316 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 C2orf73Q8N5S3 287 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ENDOVQ8N8Q3 282 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 AMER3Q8N944 861 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 SIDT2Q8NBJ9 832 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 OR2L8Q8NGY9 312 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 LCN9Q8WX39 176 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ELMO1Q92556 727 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 PPP1R2P1Q96PQ5 205 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 OR4K3Q96R72 315 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 DECR2Q9NUI1 292 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 STOX2Q9P2F5 926 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 DHCR7Q9UBM7 475 aaKnown RBP4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CTSFQ9UBX1 484 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 LNPEPQ9UIQ6 1025 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 TP53TG5Q9Y2B4 290 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CLDN16Q9Y5I7 305 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CSAG2Q9Y5P2 127 aa4.59□□□□□ -1.67
SCAF11-214ENST00000550893 CACNA1CQ13936 2221 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 ESPL1Q14674 2120 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 IGLV3-12A0A075B6K2 115 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 TMEM272A0A1B0GTI8 110 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 A0A1W2PQ72 361 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 VSTM2BA6NLU5 285 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 TMEM150CB9EJG8 249 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 SOCS6O14544 535 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 TTI1O43156 1089 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 PSMD3O43242 534 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 ZNF749O43361 778 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 DNAJB6O75190 326 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 CREG1O75629 220 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 SCRG1O75711 98 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 ZNF189O75820 626 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-214ENST00000550893 WISP2O76076 250 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 ERVK-10P10266 1014 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 AMD1P17707 334 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 VCLP18206 1134 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 EPORP19235 508 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 PTPN4P29074 926 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 FMO4P31512 558 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 NPY2RP49146 381 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 RAB28P51157 221 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 EIF3BP55884 814 aaKnown RBP4.58□□□□□ -1.68
SCAF11-214ENST00000550893 CDK16Q00536 496 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 GUCY2DQ02846 1103 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 FOXM1Q08050 763 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 HSPA14Q0VDF9 509 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 NCF4Q15080 339 aa4.58□□□□□ -1.68
SCAF11-214ENST00000550893 INPP5JQ15735 1006 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-214ENST00000550893 DEFB109BQ30KR1 87 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms