RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ZNF217O75362 1048 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 ALOX12P18054 663 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 CD38P28907 300 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 PIN1Q13526 163 aaPredicted RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 DEFB133Q30KQ1 61 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 TCTN3Q6NUS6 607 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 B3GNT8Q7Z7M8 397 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 PHF10Q8WUB8 498 aaKnown RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 HDAC2Q92769 488 aaKnown RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 TUBA8Q9NY65 449 aaPredicted RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 A0A0J9YY10 115 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 METTL12A8MUP2 240 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 FRS3O43559 492 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 UGT2B11O75310 529 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 DCNP07585 359 aaKnown RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 BUD31P41223 144 aaPredicted RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 RNF144AP50876 292 aaPredicted RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 LSM11P83369 360 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 TNFRSF17Q02223 184 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 FGD3Q5JSP0 725 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 FAM92BQ6ZTR7 304 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 TSPYL5Q86VY4 417 aaPredicted RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 CSNK1A1LQ8N752 337 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 CAMKVQ8NCB2 501 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 HSPA12BQ96MM6 686 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 TWSG1Q9GZX9 223 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 CXorf21Q9HAI6 301 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 AMBNQ9NP70 447 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 GIMAP4Q9NUV9 329 aa19.7■□□□□ 0.74
PRDM4-205ENST00000550376 NDRG4Q9ULP0 352 aaKnown RBP19.7■□□□□ 0.74
PRDM4-205ENST00000550376 OR2W5A6NFC9 320 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SLC9B1P1A6NJY1 282 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 CASC3O15234 703 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ANGPTL1O95841 491 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 CSNK1EP49674 416 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 LEXMQ3ZCV2 418 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 TRMT12Q53H54 448 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 TMEM236Q5W0B7 351 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ZNF773Q6PK81 442 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 OR7D2Q96RA2 312 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 NMNAT1Q9HAN9 279 aaPredicted RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 LYARQ9NX58 379 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 DOLKQ9UPQ8 538 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ASXL3Q9C0F0 2248 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 TMEM247A6NEH6 219 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 PCDHGA12O60330 932 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 FCMRO60667 390 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 DNAJB5O75953 348 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 EPPINO95925 133 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 GASTP01350 101 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 FHP07954 510 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ITGA2P17301 1181 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 TSFMP43897 325 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 KCNJ5P48544 419 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ESRRGP62508 458 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SHC2P98077 582 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SEC23BQ15437 767 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 OOSP2Q86WS3 158 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SPARTQ8N0X7 666 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ARL14Q8N4G2 192 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SLC16A11Q8NCK7 471 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 ALPK1Q96QP1 1244 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 SERINC2Q96SA4 455 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 CCDC3Q9BQI4 270 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 RSL24D1Q9UHA3 163 aaKnown RBP19.69■□□□□ 0.74
PRDM4-205ENST00000550376 PSME2Q9UL46 239 aa19.69■□□□□ 0.74
PRDM4-205ENST00000550376 CDH3P22223 829 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 CD27P26842 260 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 BLKP51451 505 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 CHRNEQ04844 493 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 XAF1Q6GPH4 301 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ARMC6Q6NXE6 501 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ADAMTS16Q8TE57 1224 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ZNF607Q96SK3 696 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 UCKL1Q9NWZ5 548 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 KLHL3Q9UH77 587 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 OR5K4A6NMS3 321 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 TLR4O00206 839 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 TOR1BO14657 336 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 EMC8O43402 210 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 IGFBP1P08833 259 aaPredicted RBP19.68■□□□□ 0.74
PRDM4-205ENST00000550376 RHCEP18577 417 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 BCKDHBP21953 392 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 RYKP34925 604 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 SOX18P35713 384 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 KHKP50053 298 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ELOAQ14241 798 aaKnown RBP19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ZBED5Q49AG3 693 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 RBM48Q5RL73 367 aaKnown RBP19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ABHD13Q7L211 337 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 ZNF605Q86T29 641 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 MEX3DQ86XN8 651 aaKnown RBP19.68■□□□□ 0.74
PRDM4-205ENST00000550376 AQP11Q8NBQ7 271 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 OR4K14Q8NGD5 310 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 OR9A4Q8NGU2 314 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 NCSTNQ92542 709 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 SLC9A6Q92581 669 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 MAP3K3Q99759 626 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 DGCR6LQ9BY27 220 aa19.68■□□□□ 0.74
PRDM4-205ENST00000550376 YTHDF1Q9BYJ9 559 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms