RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	OR9A2	Q8NGT5	310 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	TM9SF4	Q92544	642 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	KAT2A	Q92830	837 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	DAZL	Q92904	295 aa	Known RBP	10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	CTHRC1	Q96CG8	243 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	SCMH1	Q96GD3	660 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	RBM18	Q96H35	190 aa	Known RBP	10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	UTP23	Q9BRU9	249 aa	Known RBP	10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	WDR41	Q9HAD4	459 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	MYNN	Q9NPC7	610 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	NMRK1	Q9NWW6	199 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	HAO1	Q9UJM8	370 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	HRH3	Q9Y5N1	445 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	COL12A1	Q99715	3063 aa		10.38	□□□□□ -0.75
RAB5B-208	ENST00000550283	TRAV17	A0A0B4J275	112 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	TMEM114	B3SHH9	223 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	ATP1B1	P05026	303 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	RNF224	P0DH78	156 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	DDC	P20711	480 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	HLCS	P50747	726 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	TDGF1P3	P51864	188 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	GPR85	P60893	370 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	OC90	Q02509	493 aa	Predicted RBP	10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	STX3	Q13277	289 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	PTGR1	Q14914	329 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	CEBPE	Q15744	281 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	ZNF628	Q5EBL2	1059 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	PIGG	Q5H8A4	983 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	HHAT	Q5VTY9	493 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	IL20RB	Q6UXL0	311 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	GALNTL5	Q7Z4T8	443 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	GALNT12	Q8IXK2	581 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	LGI4	Q8N135	537 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	KRTCAP2	Q8N6L1	136 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	OR7G2	Q8NG99	324 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	C16orf52	Q8NHV5	167 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	PPP1R14C	Q8TAE6	165 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	ADIPOR1	Q96A54	375 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	BRINP2	Q9C0B6	783 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	WWTR1	Q9GZV5	400 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	GLIPR2	Q9H4G4	154 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	SLC35C2	Q9NQQ7	365 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	LRFN1	Q9P244	771 aa		10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	COPG1	Q9Y678	874 aa	Known RBP	10.37	□□□□□ -0.75
RAB5B-208	ENST00000550283	MYO1G	B0I1T2	1018 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	RGS14	O43566	566 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	SLC25A12	O75746	678 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	WISP1	O95388	367 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	CBX6	O95503	412 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	SP1	P08047	785 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	CCL3	P10147	92 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	DRD2	P14416	443 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	CSNK2A2	P19784	350 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	GPX3	P22352	226 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	GALNS	P34059	522 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	SERPINB5	P36952	375 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	EMD	P50402	254 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	SSR4	P51571	173 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	GNGT1	P63211	74 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	OCRL	Q01968	901 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	MAP4K2	Q12851	820 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	ZNF791	Q3KP31	576 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	RNF111	Q6ZNA4	994 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	ZNF551	Q7Z340	670 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	PRR22	Q8IZ63	422 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	LRRC25	Q8N386	305 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	VWA5B2	Q8N398	1253 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	LIX1	Q8N485	282 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	CPSF7	Q8N684	471 aa	Known RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	OR8K3	Q8NH51	312 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	FRMD6	Q96NE9	622 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	GAL3ST4	Q96RP7	486 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	ITPA	Q9BY32	194 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	NUF2	Q9BZD4	464 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	STMN4	Q9H169	189 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	NXF5	Q9H1B4	397 aa	Known RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	OR10A5	Q9H207	317 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	AKTIP	Q9H8T0	292 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	PROK2	Q9HC23	129 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	EML4	Q9HC35	981 aa	Known RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	MARCO	Q9UEW3	520 aa	Predicted RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	TEKT2	Q9UIF3	430 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	ERVK-11	Q9UQG0	969 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	RAP2C	Q9Y3L5	183 aa		10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	TEP1	Q99973	2627 aa	Known RBP	10.36	□□□□□ -0.75
RAB5B-208	ENST00000550283	UTP20	O75691	2785 aa	Known RBP	10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	C17orf51	A8MQB3	221 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	SDHD	O14521	159 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	ZNF195	O14628	629 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	NME2P1	O60361	137 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	KLHL41	O60662	606 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	SHOX2	O60902	331 aa	Predicted RBP	10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	C1QC	P02747	245 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	NEFH	P12036	1026 aa		10.35	□□□□□ -0.75
RAB5B-208	ENST00000550283	COX7A2	P14406	83 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms