RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GPAT3Q53EU6 434 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 EIPR1Q53HC9 387 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 SLC25A30Q5SVS4 291 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 C12orf73Q69YU5 71 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PLAG1Q6DJT9 500 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 NIPAL1Q6NVV3 410 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GDPGP1Q6ZNW5 385 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 C16orf62Q7Z3J2 963 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 SLC46A3Q7Z3Q1 461 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PAQR7Q86WK9 346 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 RBM12BQ8IXT5 1001 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 CYP4Z2PQ8N1L4 340 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 LRRC25Q8N386 305 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 AVL9Q8NBF6 648 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GPR32P1Q8NGA4 272 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 OR4E2Q8NGC2 313 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 VANGL1Q8TAA9 524 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 FAM174AQ8TBP5 190 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 DYNC2LI1Q8TCX1 351 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 GNPDA2Q8TDQ7 276 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ADAMTS15Q8TE58 950 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 RSC1A1Q92681 617 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 RERGQ96A58 199 aaPredicted RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ERLEC1Q96DZ1 483 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 MS4A4EQ96PG1 132 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ABCG4Q9H172 646 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 S1PR5Q9H228 398 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ARMC7Q9H6L4 198 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 SIAEQ9HAT2 523 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 FGF22Q9HCT0 170 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 CHCHD3Q9NX63 227 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 CCDC59Q9P031 241 aaKnown RBP8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PTGFRNQ9P2B2 879 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 KLF15Q9UIH9 416 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 FBXW2Q9UKT8 454 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 MKLN1Q9UL63 735 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 ERGIC3Q9Y282 383 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 HS3ST3A1Q9Y663 406 aa8.44□□□□□ -1.06
TMEM116-209ENST00000550020 KIR2DS5A0A0G2JLQ3 304 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 A0A0G2JNG1 304 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TRBV4-1A0A0J9YWV2 114 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 A0A1W2PQF6 199 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 C2orf74A8MZ97 194 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 KIR2DS3K7RE56 304 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TAF4O00268 1085 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 AP3D1O14617 1153 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ZSCAN9O15535 394 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 LINC01565O15544 149 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 AK1P00568 194 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TNFP01375 233 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 HMGN2P05204 90 aaKnown RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 LCKP06239 509 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 POU2F1P14859 743 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 CPN2P22792 545 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 CSTF2P33240 577 aaKnown RBP eCLIP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 CNR2P34972 360 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 PBX2P40425 430 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ACTR1BP42025 376 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 MAGEA10P43363 369 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 RABIFP47224 123 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 SOX9P48436 509 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 PRKAG1P54619 331 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 LIM2P55344 173 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TAS2R41P59536 307 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 SRP54P61011 504 aaKnown RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ACTR1AP61163 376 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 COPZ1P61923 177 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 SKP1P63208 163 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 RHAGQ02094 409 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TNFRSF17Q02223 184 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ST3GAL3Q11203 375 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 HYAL2Q12891 473 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TARDBPQ13148 414 aaKnown RBP eCLIP8.43□□□□□ -1.064e-9■■■■■ 33.8
TMEM116-209ENST00000550020 AQP6Q13520 282 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 HTR4Q13639 388 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 IRF3Q14653 427 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 KIR2DS5Q14953 304 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 LARS2Q15031 903 aaKnown RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TRAM2Q15035 370 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 SYPL1Q16563 259 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TRIM16LQ309B1 348 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 FAM214AQ32MH5 1076 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF404Q494X3 552 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 KLHL22Q53GT1 634 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF311Q5JNZ3 666 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 KIAA1324Q6UXG2 1013 aaKnown RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF793Q6ZN11 406 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF554Q86TJ5 538 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 OOSP2Q86WS3 158 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 SLC15A4Q8N697 577 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 DRAXINQ8NBI3 349 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-209ENST00000550020 NUP43Q8NFH3 380 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 B3GNT7Q8NFL0 401 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 OR4K14Q8NGD5 310 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 MCFD2Q8NI22 146 aa8.43□□□□□ -1.06
TMEM116-209ENST00000550020 TEX47Q8TBZ9 253 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms