RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 GPR75O95800 540 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 TBX6O95947 436 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 C1QAP02745 245 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 IGKV3-11P04433 115 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 RFPL3SP0C7P2 107 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 PAX1P15863 534 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 OPRM1P35372 400 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 TIMP3P35625 211 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 GP5P40197 560 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 RAB10P61026 200 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 IGLV3-21P80748 117 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 TNFRSF17Q02223 184 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 CALCOCO2Q13137 446 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 DUSP8Q13202 625 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 RCAN2Q14206 197 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 OR4D1Q15615 310 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 TBC1D1Q86TI0 1168 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 CTAGE3PQ8IX95 158 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 C9orf40Q8IXQ3 194 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 LAS2Q8IYD9 372 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 LRRC25Q8N386 305 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 OR7G3Q8NG95 312 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 OR10G3Q8NGC4 313 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 NTNG2Q96CW9 530 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 C16orf45Q96MC5 204 aaPredicted RBP7.76□□□□□ -1.17
TROAP-208ENST00000548817 CCL19Q99731 98 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 WWTR1Q9GZV5 400 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 ALG9Q9H6U8 611 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 SH2D2AQ9NP31 389 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 SAYSD1Q9NPB0 183 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 SNX15Q9NRS6 342 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 SNX24Q9Y343 169 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
TROAP-208ENST00000548817 ANKRD33BA6NCL7 494 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 SYCE1LA8MT33 242 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 EEF1E1-BLOC1S5C9J1V9 151 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 E7ESA3 106 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CASKO14936 926 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 EEF1E1O43324 174 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 PRAMEF4O60810 478 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CDH16O75309 829 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 LRATO95237 230 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ACSL3O95573 720 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 NR2F6P10588 404 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CD22P20273 847 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ENDOUP21128 410 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 CTSSP25774 331 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 PIK3R1P27986 724 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CRABP2P29373 138 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CEACAM8P31997 349 aaPredicted RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 GALNSP34059 522 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ARL1P40616 181 aaPredicted RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 PIK3CBP42338 1070 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ARFIP1P53367 373 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 PCDH1Q08174 1060 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 SLMAPQ14BN4 828 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 FASTKD3Q14CZ7 662 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 SETDB1Q15047 1291 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 POU4F3Q15319 338 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 RPS6KA2Q15349 733 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ACKR1Q16570 336 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 NTRK2Q16620 822 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 SPRED3Q2MJR0 410 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ACSF3Q4G176 576 aaPredicted RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 GRTP1Q5TC63 336 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 PRAMEF9Q5VWM5 478 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 C18orf63Q68DL7 685 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 GRHL2Q6ISB3 625 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ZCCHC7Q8N3Z6 543 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 MEIOBQ8N635 442 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TEX9Q8N6V9 391 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TNIP2Q8NFZ5 429 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 HUS1BQ8NHY5 278 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 PPP1R14CQ8TAE6 165 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 LINC01560Q8TB33 94 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 DOK4Q8TEW6 326 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TP53INP1Q96A56 240 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TRIB1Q96RU8 372 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 MTERF1Q99551 399 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 GPR22Q99680 433 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 RBBP8Q99708 897 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TIMP4Q99727 224 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 WDR83Q9BRX9 315 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 SORBS1Q9BX66 1292 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 EPB41L4BQ9H329 900 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 ACTR8Q9H981 624 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 TRMT1Q9NXH9 659 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 CDC42EP3Q9UKI2 254 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 CNOT11Q9UKZ1 510 aaKnown RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 CHCHD2Q9Y6H1 151 aaPredicted RBP7.75□□□□□ -1.17
TROAP-208ENST00000548817 NOTCH1P46531 2555 aa7.75□□□□□ -1.17
TROAP-208ENST00000548817 NCKAP5O14513 1909 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 LRRC3CA6NJW4 275 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 GLOD5A6NK44 160 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 UBXN8O00124 270 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 HRKO00198 91 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 EIF3HO15372 352 aaKnown RBP eCLIP7.74□□□□□ -1.17
TROAP-208ENST00000548817 CD5LO43866 347 aa7.74□□□□□ -1.17
TROAP-208ENST00000548817 TRIM3O75382 744 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms