RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 P04436 131 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ATP1B1P05026 303 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 SNRPAP09012 282 aaKnown RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 GLI4P10075 376 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ACVR2AP27037 513 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 CHRNB4P30926 498 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 TLX1P31314 330 aaPredicted RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 PTGDSP41222 190 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 PRICKLE4Q2TBC4 344 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 GXYLT1Q4G148 440 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 GLE1Q53GS7 698 aaKnown RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 SGO1Q5FBB7 561 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 DCST1Q5T197 706 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 C10orf62Q5T681 223 aaPredicted RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 FAM180BQ6P0A1 224 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 FAM111BQ6SJ93 734 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 MEX3BQ6ZN04 569 aaKnown RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 TIFABQ6ZNK6 161 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 SLC29A4Q7RTT9 530 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 LIX1LQ8IVB5 337 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 PRR22Q8IZ63 422 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 C1orf52Q8N6N3 182 aaKnown RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 NAXEQ8NCW5 288 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 FAM13CQ8NE31 585 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 MYRIPQ8NFW9 859 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 LILRB4Q8NHJ6 448 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 TRPC4APQ8TEL6 797 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 CTHRC1Q96CG8 243 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 C14orf79Q96F83 325 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 CNRIP1Q96F85 164 aaPredicted RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 RBM18Q96H35 190 aaKnown RBP11.42□□□□□ -0.58
GCN1-204ENST00000548132 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ZNF382Q96SR6 550 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 TTYH2Q9BSA4 534 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ITPAQ9BY32 194 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ACPTQ9BZG2 426 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 ZFP64Q9NPA5 681 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 Q9UFV3 132 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 SLC12A4Q9UP95 1085 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 MED12LQ86YW9 2145 aa11.42□□□□□ -0.58
GCN1-204ENST00000548132 MED13LQ71F56 2210 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 MANBAO00462 879 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 BCKDKO14874 412 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 SUSD5O60279 629 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 HCN1O60741 890 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 OTCP00480 354 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 HSD17B3P37058 310 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 ARL1P40616 181 aaPredicted RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 MAPK12P53778 367 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 WNT3P56703 355 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 KCNJ2P63252 427 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 CLCQ05315 142 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 CRYZQ08257 329 aaKnown RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 IFT88Q13099 833 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 BIKQ13323 160 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 EXOSC7Q15024 291 aaKnown RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 PRSS53Q2L4Q9 553 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 SLC22A10Q63ZE4 541 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 SH2D5Q6ZV89 423 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 MILR1Q7Z6M3 343 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 DND1Q8IYX4 353 aaKnown RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 CDYL2Q8N8U2 506 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 RELL2Q8NC24 303 aaPredicted RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 MNS1Q8NEH6 495 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 C17orf47Q8NEP4 570 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 OR5M3Q8NGP4 307 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 SPPL2AQ8TCT8 520 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 CA5BP1Q8WTZ4 195 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 HGDQ93099 445 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 ZNF597Q96LX8 424 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 RILPQ96NA2 401 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 KCNA7Q96RP8 456 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 TSPYL1Q9H0U9 437 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 OR10A5Q9H207 317 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 GSTO2Q9H4Y5 243 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 ELOVL6Q9H5J4 265 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 WDR41Q9HAD4 459 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 BRF2Q9HAW0 419 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 PRM3Q9NNZ6 103 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 TNFRSF12AQ9NP84 129 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.41□□□□□ -0.58
GCN1-204ENST00000548132 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
GCN1-204ENST00000548132 PCNX3Q9H6A9 2034 aa11.41□□□□□ -0.58
GCN1-204ENST00000548132 IQANK1A0A1B0GTG1 560 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 C2orf92A0A1B0GVN3 265 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 ANKRD33BA6NCL7 494 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 FIGNL2A6NMB9 653 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 UBFD1O14562 309 aaKnown RBP11.4□□□□□ -0.58
GCN1-204ENST00000548132 NME6O75414 186 aaPredicted RBP11.4□□□□□ -0.58
GCN1-204ENST00000548132 PIK3R1P27986 724 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 ABCD3P28288 659 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 MAN2A2P49641 1150 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 XKP51811 444 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 FOXA1P55317 472 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 DLX5P56178 289 aa11.4□□□□□ -0.58
GCN1-204ENST00000548132 MRPS35P82673 323 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms