RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ZCCHC18P0CG32 403 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 CPN2P22792 545 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 BUD31P41223 144 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 LIM2P55344 173 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 SSPNQ14714 243 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 KPNB1Q14974 876 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 LINC00303Q3SY05 128 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 GTDC1Q4AE62 458 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 C18orf63Q68DL7 685 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 NIPAL1Q6NVV3 410 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 ZNF621Q6ZSS3 439 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 RAB43Q86YS6 212 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 CA13Q8N1Q1 262 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 TTC9Q92623 222 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 NPLQ9BXD5 320 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 TRIM8Q9BZR9 551 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 C14orf105Q9NVL8 296 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 MS4A12Q9NXJ0 267 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 SUCOQ9UBS9 1254 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 NXT1Q9UKK6 140 aaKnown RBP16.29■□□□□ 0.2
HDAC7-227ENST00000548080 DAPP1Q9UN19 280 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 ERVK-11Q9UQG0 969 aa16.29■□□□□ 0.2
HDAC7-227ENST00000548080 ATRXP46100 2492 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 PGRMC2O15173 223 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 MGRN1O60291 552 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 B4GALT2O60909 372 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 C6orf47O95873 294 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 FAM87AP0C7U9 286 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 HSD17B1P14061 328 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 TCN1P20061 433 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-227ENST00000548080 MSX2P35548 267 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-227ENST00000548080 EMP2P54851 167 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 MTPNP58546 118 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 LIPEQ05469 1076 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 SELPLGQ14242 412 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 SLC48A1Q6P1K1 146 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 PCSK4Q6UW60 755 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 LANCL3Q6ZV70 420 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 OR5P2Q8WZ92 322 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 CPPED1Q9BRF8 314 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-227ENST00000548080 THUMPD3Q9BV44 507 aaKnown RBP16.28■□□□□ 0.2
HDAC7-227ENST00000548080 VN1R1Q9GZP7 353 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 SLC35C2Q9NQQ7 365 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 C5AR2Q9P296 337 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 UTS2RQ9UKP6 389 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 CES1P1Q9UKY3 287 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 VPS4AQ9UN37 437 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 HS3ST3B1Q9Y662 390 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 KCNMB2Q9Y691 235 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 SPACA6W5XKT8 324 aa16.28■□□□□ 0.2
HDAC7-227ENST00000548080 GLOD5A6NK44 160 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 SOCS6O14544 535 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 DNAJA2O60884 412 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 PRKRAO75569 313 aaKnown RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 CD63P08962 238 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 NR2F6P10588 404 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TLX1P31314 330 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 FRKP42685 505 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 GSK3BP49841 420 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 ACTR3P61158 418 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 SKP1P63208 163 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TNFRSF17Q02223 184 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 EEF1A2Q05639 463 aaKnown RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TRAP1Q12931 704 aaKnown RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 LY6DQ14210 128 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TRIM25Q14258 630 aaKnown RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 CRTC2Q53ET0 693 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-227ENST00000548080 BORAQ6PGQ7 559 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 FAM156AQ8NDB6 213 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 ECSITQ9BQ95 431 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TGIF2Q9GZN2 237 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 PRDM9Q9NQV7 894 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 LANCL2Q9NS86 450 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 P4HTMQ9NXG6 502 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 TAS2R9Q9NYW1 312 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 PSME2Q9UL46 239 aa16.27■□□□□ 0.19
HDAC7-227ENST00000548080 WASHC1A8K0Z3 465 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 FHP07954 510 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 RNH1P13489 461 aaKnown RBP16.26■□□□□ 0.19
HDAC7-227ENST00000548080 MMP11P24347 488 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 MANFP55145 182 aaKnown RBP16.26■□□□□ 0.19
HDAC7-227ENST00000548080 HBA1P69905 142 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 MS4A2Q01362 244 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 RHDQ02161 417 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 RIPK1Q13546 671 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 TMEM52Q8NDY8 209 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 TSLPQ969D9 159 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 ASB9Q96DX5 294 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 ZBED6CLQ96FA7 236 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-227ENST00000548080 AURKBQ96GD4 344 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-227ENST00000548080 CSF3RQ99062 836 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 KCTD14Q9BQ13 255 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-227ENST00000548080 ARHGAP9Q9BRR9 750 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 FAM117AQ9C073 453 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 ALG2Q9H553 416 aa16.26■□□□□ 0.19
HDAC7-227ENST00000548080 CLK4Q9HAZ1 481 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms