RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CHCHD2Q9Y6H1 151 aaPredicted RBP8.62□□□□□ -1.03
YBX3-218ENST00000546298 RELNP78509 3460 aa8.62□□□□□ -1.03
YBX3-218ENST00000546298 MANBAO00462 879 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 RIPK2O43353 540 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ERAL1O75616 437 aaKnown RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 OR4F21O95013 312 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ESRRBO95718 433 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 PDYNP01213 254 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ATP1B1P05026 303 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 GSTA1P08263 222 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 IMPDH1P20839 514 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 HMOX2P30519 316 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZFP36L2P47974 494 aaKnown RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 NUP107P57740 925 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 NAA20P61599 178 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 MAP4K2Q12851 820 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 SF3B4Q15427 424 aaKnown RBP eCLIP8.61□□□□□ -1.036e-8■■■■■ 40.2
YBX3-218ENST00000546298 UNC50Q53HI1 259 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 GPRIN3Q6ZVF9 776 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 CCDC71Q8IV32 467 aaPredicted RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 SAMD14Q8IZD0 417 aaPredicted RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 CLYBLQ8N0X4 340 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 VWA5B2Q8N398 1253 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF615Q8N8J6 731 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 CDYL2Q8N8U2 506 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 GBP7Q8N8V2 638 aaPredicted RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 ACBD4Q8NC06 268 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 METTL6Q8TCB7 284 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 SPPL2AQ8TCT8 520 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 UCN3Q969E3 161 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 TM4SF18Q96CE8 201 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 CCDC126Q96EE4 140 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 LURAP1Q96LR2 239 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF597Q96LX8 424 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF382Q96SR6 550 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 TTYH2Q9BSA4 534 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 BRINP2Q9C0B6 783 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF703Q9H7S9 590 aaPredicted RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 TMEM216Q9P0N5 145 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 VPS29Q9UBQ0 182 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 FETUBQ9UGM5 382 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 CNOT11Q9UKZ1 510 aaKnown RBP8.61□□□□□ -1.03
YBX3-218ENST00000546298 PCDHGB3Q9Y5G1 929 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 LIPGQ9Y5X9 500 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 ZNF780BQ9Y6R6 833 aa8.61□□□□□ -1.03
YBX3-218ENST00000546298 LRRC3CA6NJW4 275 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 FAM90A27PA6NNH2 459 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 AHRRA9YTQ3 701 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 H3BQF6 201 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PPP6CO00743 305 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 DLX3O60479 287 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 TRIM3O75382 744 aaPredicted RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 BCAS2O75934 225 aaPredicted RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 TOXO94900 526 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 CLPSP04118 112 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 ENO1P06733 434 aaKnown RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 CELA3AP09093 270 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 SBK3P0C264 359 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 RFPL3SP0C7P2 107 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 GLI4P10075 376 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 DRD2P14416 443 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 TSPAN8P19075 237 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 GDF1P27539 372 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 GCKP35557 465 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 FEN1P39748 380 aaKnown RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 GSTM5P46439 218 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 MASP1P48740 699 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 ALDH9A1P49189 494 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PRKAA2P54646 552 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PKNOX1P55347 436 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 DCAF7P61962 342 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 TLE4Q04727 773 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 ACSM2AQ08AH3 577 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 GALNT1Q10472 559 aaPredicted RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 CSTF3Q12996 717 aaKnown RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 ZNF678Q5SXM1 525 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 C1orf185Q5T7R7 199 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 ACSM2BQ68CK6 577 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 TMEM64Q6YI46 380 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 NUP54Q7Z3B4 507 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 C1orf52Q8N6N3 182 aaKnown RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 NEIL3Q8TAT5 605 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 ADIPOR1Q96A54 375 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 KLHL29Q96CT2 875 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 HSPBAP1Q96EW2 488 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 TREX2Q9BQ50 279 aaPredicted RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 ANGPTL4Q9BY76 406 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 SHCBP1LQ9BZQ2 653 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PROK2Q9HC23 129 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PFDN4Q9NQP4 134 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 GIMAP4Q9NUV9 329 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 PSMC3IPQ9P2W1 217 aaPredicted RBP8.6□□□□□ -1.03
YBX3-218ENST00000546298 PRODH2Q9UF12 536 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 DCDC2Q9UHG0 476 aa8.6□□□□□ -1.03
YBX3-218ENST00000546298 BCAP29Q9UHQ4 241 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms