RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PXKQ7Z7A4 578 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 SLC35F5Q8WV83 523 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 HOXB13Q92826 284 aaPredicted RBP14.77□□□□□ -0.05
CHD4-210ENST00000544040 SUSD3Q96L08 255 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 MINDY3Q9H8M7 445 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 SMOXQ9NWM0 555 aa14.77□□□□□ -0.05
CHD4-210ENST00000544040 FAM189A1O60320 539 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 C10orf62Q5T681 223 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 LEG1Q6P5S2 330 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 TMPPEQ6ZT21 453 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 C14orf80Q86SX3 495 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 TOR1AIP2Q8NFQ8 470 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 MOAP1Q96BY2 351 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 MYRFLQ96LU7 910 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 WDR6Q9NNW5 1121 aaKnown RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 NUPL2O15504 423 aaKnown RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 HPRP00739 348 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 CAPNS1P04632 268 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 NKX6-1P78426 367 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 MRPL49Q13405 166 aaKnown RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 GK2Q14410 553 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 CRTC1Q6UUV9 634 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 KLHL9Q9P2J3 617 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 TSPAN6O43657 245 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 MAP4K2Q12851 820 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 TRAPPC6BQ86SZ2 158 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 CELF5Q8N6W0 485 aaKnown RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 RCBTB1Q8NDN9 531 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 OR5H2Q8NGV7 314 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 CHPT1Q8WUD6 406 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 ZNF382Q96SR6 550 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 C11orf84Q9BUA3 381 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 LHPPQ9H008 270 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 PPP4R1LQ9P1A2 415 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 FAM171A2A8MVW0 826 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 SLC1A7O00341 560 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 PBX2P40425 430 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 PLCXD2Q0VAA5 305 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 GRASPQ7Z6J2 395 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 ARHGAP12Q8IWW6 846 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 OR4K13Q8NH42 304 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 TMEM248Q9NWD8 314 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 ATE1O95260 518 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 RETP07949 1114 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 HTR1EP28566 365 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 SOX3P41225 446 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 C18orf21Q32NC0 220 aaPredicted RBP14.76□□□□□ -0.05
CHD4-210ENST00000544040 RAET1LQ5VY80 246 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 OR4N5Q8IXE1 308 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 CDC6Q99741 560 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
CHD4-210ENST00000544040 MEIS3P1A6NDR6 274 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PRAMEF11O60813 436 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 RAB3BP20337 219 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 HNF1BP35680 557 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ETV5P41161 510 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PITPNBP48739 271 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ACTA2P62736 377 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ACTG2P63267 376 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 BCL2A1Q16548 175 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 LIPJQ5W064 366 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 Q6ZVL8 140 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 SAMD11Q96NU1 681 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 IL17FQ96PD4 163 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ANHXE9PGG2 379 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 IFNA17P01571 189 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 GSCP56915 257 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 NLGN4YQ8NFZ3 816 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 SDSLQ96GA7 329 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 SIGLEC10Q96LC7 697 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ZBTB20Q9HC78 741 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 OARD1Q9Y530 152 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 CIB4A0PJX0 185 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 HSBP1L1C9JCN9 74 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 LILRB5O75023 590 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 KCNC3Q14003 757 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 RNASE10Q5GAN6 216 aaKnown RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 GPR149Q86SP6 731 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 NPRL2Q8WTW4 380 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 TRUB1Q8WWH5 349 aaKnown RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 MAL2Q969L2 176 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PTERQ96BW5 349 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 F2RL3Q96RI0 385 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 POLR1CO15160 346 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 PRICKLE3O43900 615 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 PAHP00439 452 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 GALTP07902 379 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 SSTR4P31391 388 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 POU4F3Q15319 338 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PCGF3Q3KNV8 242 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ASPGQ86U10 573 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PM20D2Q8IYS1 436 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 DRAXINQ8NBI3 349 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 TMEM234Q8WY98 164 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 SCAMP4Q969E2 229 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 PRR11Q96HE9 360 aaPredicted RBP14.75□□□□□ -0.05
CHD4-210ENST00000544040 TMEM59LQ9UK28 342 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 CYP8B1Q9UNU6 501 aa14.75□□□□□ -0.05
CHD4-210ENST00000544040 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms