RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 EXOSC7Q15024 291 aaKnown RBP18.2■□□□□ 0.5
DDX11-220ENST00000542244 EIPR1Q53HC9 387 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 TCHHL1Q5QJ38 904 aaPredicted RBP18.2■□□□□ 0.5
DDX11-220ENST00000542244 RIPPLY2Q5TAB7 128 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 LETMD1Q6P1Q0 360 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 KLC3Q6P597 504 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 GALNT12Q8IXK2 581 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 ZZZ3Q8IYH5 903 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 TIMP4Q99727 224 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 PELOQ9BRX2 385 aaKnown RBP18.2■□□□□ 0.5
DDX11-220ENST00000542244 NTMT1Q9BV86 223 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 FUT8Q9BYC5 575 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 NXF5Q9H1B4 397 aaKnown RBP18.2■□□□□ 0.5
DDX11-220ENST00000542244 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.2■□□□□ 0.5
DDX11-220ENST00000542244 KCNN3Q9UGI6 736 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 TNPO3Q9Y5L0 923 aaKnown RBP18.2■□□□□ 0.5
DDX11-220ENST00000542244 FREM3P0C091 2139 aa18.2■□□□□ 0.5
DDX11-220ENST00000542244 C15orf38-AP3S2A0A0A6YYH1 394 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 FOXO6A8MYZ6 492 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 SEMA3DO95025 777 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 PDYNP01213 254 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 RPS17P08708 135 aaKnown RBP18.19■□□□□ 0.5
DDX11-220ENST00000542244 CPMP14384 443 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 NT5EP21589 574 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 GPX3P22352 226 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 PIK3R1P27986 724 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 DNAJA1P31689 397 aaKnown RBP18.19■□□□□ 0.5
DDX11-220ENST00000542244 FEN1P39748 380 aaKnown RBP18.19■□□□□ 0.5
DDX11-220ENST00000542244 TBL3Q12788 808 aaKnown RBP18.19■□□□□ 0.5
DDX11-220ENST00000542244 RPS6KA2Q15349 733 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 LTB4RQ15722 352 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 ACSF3Q4G176 576 aaPredicted RBP18.19■□□□□ 0.5
DDX11-220ENST00000542244 PLXDC2Q6UX71 529 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 COMMD6Q7Z4G1 85 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 CCDC91Q7Z6B0 441 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 METTL4Q8N3J2 472 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 ADCY4Q8NFM4 1077 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 OR4K14Q8NGD5 310 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 DCAKDQ8WVC6 231 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 PAFAH2Q99487 392 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 ANGPTL4Q9BY76 406 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 UBQLN3Q9H347 655 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 ANKRA2Q9H9E1 313 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 WDR41Q9HAD4 459 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 MED13LQ71F56 2210 aa18.19■□□□□ 0.5
DDX11-220ENST00000542244 CCDC189A1A4V9 331 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 ANKRD33BA6NCL7 494 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 GNB5O14775 395 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 TRAPPC6AO75865 159 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 CHN1P15882 459 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 PTGDSP41222 190 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 CASP3P42574 277 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 AGFG1P52594 562 aaKnown RBP18.18■□□□□ 0.5
DDX11-220ENST00000542244 CCNYL2Q5T2Q4 361 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
DDX11-220ENST00000542244 ARSKQ6UWY0 536 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 MILR1Q7Z6M3 343 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 TAGAPQ8N103 731 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 ZNF483Q8TF39 744 aaPredicted RBP18.18■□□□□ 0.5
DDX11-220ENST00000542244 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
DDX11-220ENST00000542244 TP53INP1Q96A56 240 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 TM4SF18Q96CE8 201 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 ZNF597Q96LX8 424 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 NODALQ96S42 347 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 SH3GL2Q99962 352 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 ITPAQ9BY32 194 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 MAT2BQ9NZL9 334 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 EHD3Q9NZN3 535 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 PCDHA9Q9Y5H5 950 aa18.18■□□□□ 0.5
DDX11-220ENST00000542244 A8MT66 165 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 TRIM49D1C9J1S8 452 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 POC1B-GALNT4F8VUJ3 575 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 STX16-NPEPL1H3BU86 382 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 STX16O14662 325 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 ABCB1P08183 1280 aaPredicted RBP18.17■□□□□ 0.5
DDX11-220ENST00000542244 CTAGE8P0CG41 777 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 ABCD3P28288 659 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 CDK9P50750 372 aaKnown RBP18.17■□□□□ 0.5
DDX11-220ENST00000542244 ART1P52961 327 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 IST1P53990 364 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 PRICKLE4Q2TBC4 344 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 WIPI1Q5MNZ9 446 aaPredicted RBP18.17■□□□□ 0.5
DDX11-220ENST00000542244 TMEM198Q66K66 360 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 RELL1Q8IUW5 271 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 CTAGE4Q8IX94 777 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 DND1Q8IYX4 353 aaKnown RBP18.17■□□□□ 0.5
DDX11-220ENST00000542244 CLYBLQ8N0X4 340 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 LIX1Q8N485 282 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 C7orf57Q8NEG2 295 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 HGDQ93099 445 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 GPATCH1Q9BRR8 931 aaKnown RBP18.17■□□□□ 0.5
DDX11-220ENST00000542244 QPCTLQ9NXS2 382 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 CRIM1Q9NZV1 1036 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 HEY2Q9UBP5 337 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 SLC12A4Q9UP95 1085 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 C15orf41Q9Y2V0 281 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 ARHGAP21Q5T5U3 1957 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 EXPH5Q8NEV8 1989 aa18.17■□□□□ 0.5
DDX11-220ENST00000542244 MED12Q93074 2177 aa18.16■□□□□ 0.5
DDX11-220ENST00000542244 CTAG2O75638 210 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms