RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PCDHB14Q9Y5E9 798 aa9.94□□□□□ -0.82
ATL3-204ENST00000540699 UBR5O95071 2799 aaPredicted RBP9.94□□□□□ -0.82
ATL3-204ENST00000540699 NUP214P35658 2090 aaPredicted RBP9.94□□□□□ -0.82
ATL3-204ENST00000540699 A0A1W2PQ72 361 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 C1orf226A1L170 272 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 ZNF860A6NHJ4 632 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 B8ZZF3 427 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 RFXANKO14593 260 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 PCDH17O14917 1159 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 NKX2-8O15522 239 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 CHST10O43529 356 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 DNAJA2O60884 412 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 DNAJB6O75190 326 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 BCAS2O75934 225 aaPredicted RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 IGHEP01854 428 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 DRD2P14416 443 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 FOLR3P41439 243 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 GSK3BP49841 420 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 GZMMP51124 257 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 EFNA3P52797 238 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 FOXL2P58012 376 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 MTPNP58546 118 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 BTN3A2P78410 334 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 TRAP1Q12931 704 aaKnown RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 SLAMF1Q13291 335 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 RUNX2Q13950 521 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 TRIM25Q14258 630 aaKnown RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 SSPNQ14714 243 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 VWA2Q5GFL6 755 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 C6orf163Q5TEZ5 329 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 FAM69BQ5VUD6 431 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 DNAJC14Q6Y2X3 702 aaPredicted RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 PPP1R32Q7Z5V6 425 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 PTRH1Q86Y79 214 aaKnown RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 SHISA5Q8N114 240 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 CA13Q8N1Q1 262 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 NATD1Q8N6N6 113 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 FAM156AQ8NDB6 213 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 UCN3Q969E3 161 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 CIDECQ96AQ7 238 aaPredicted RBP9.93□□□□□ -0.82
ATL3-204ENST00000540699 LYRM4Q9HD34 91 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 SLAMF7Q9NQ25 335 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 SEMA3GQ9NS98 782 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 KCMF1Q9P0J7 381 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 ATG4BQ9Y4P1 393 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 HECTD1Q9ULT8 2610 aa9.93□□□□□ -0.82
ATL3-204ENST00000540699 A0A1W2PR48 441 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 IDSB3KWA1 339 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 PROM1O43490 865 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 B3GALT2O43825 422 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 AIFM1O95831 613 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 GSNP06396 782 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 RNH1P13489 461 aaKnown RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 TCN1P20061 433 aaPredicted RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 MMP11P24347 488 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 HTR1EP28566 365 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 MSX2P35548 267 aaPredicted RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 XCR1P46094 333 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 OLR1P78380 273 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 RHAGQ02094 409 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 LIPEQ05469 1076 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 BNIP2Q12982 314 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 GAB1Q13480 694 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 NDUFAF5Q5TEU4 345 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 TMEM205Q6UW68 189 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 MRGPREQ86SM8 312 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 LAPTM4BQ86VI4 370 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 CALHM3Q86XJ0 350 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 RAB43Q86YS6 212 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 VPS37AQ8NEZ2 397 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 ADAMTS18Q8TE60 1221 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 THAP4Q8WY91 577 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 JADE3Q92613 823 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 TBC1D20Q96BZ9 403 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 IP6K3Q96PC2 410 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 PANX1Q96RD7 426 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 MAPKAP1Q9BPZ7 522 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 CRB3Q9BUF7 120 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 FAIM2Q9BWQ8 316 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 PCDHAC1Q9H158 963 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 MUC13Q9H3R2 512 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 ALG2Q9H553 416 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 SOX17Q9H6I2 414 aaPredicted RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 KAT8Q9H7Z6 458 aaKnown RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 COPS7BQ9H9Q2 264 aaPredicted RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 MIEF1Q9NQG6 463 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 PRDM9Q9NQV7 894 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.92□□□□□ -0.82
ATL3-204ENST00000540699 CES1P1Q9UKY3 287 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 DAPP1Q9UN19 280 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 AP3M1Q9Y2T2 418 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 L3MBTL1Q9Y468 752 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 HS3ST3B1Q9Y662 390 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 PTPN13Q12923 2485 aa9.92□□□□□ -0.82
ATL3-204ENST00000540699 LOC102723996A0A087X1L8 192 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 CYR61O00622 381 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 SOCS6O14544 535 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PDPK1O15530 556 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 GUCY1B2O75343 617 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms