RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MMP11P24347 488 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 MYL9P24844 172 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ITGB8P26012 769 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 SDC2P34741 201 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 WNT4P56705 351 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 TPBGQ13641 420 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 GPAT3Q53EU6 434 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PARS2Q7L3T8 475 aaKnown RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 NOXA1Q86UR1 476 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZNF547Q8IVP9 402 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZNF366Q8N895 744 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 AP3S1Q92572 193 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 FRMD6Q96NE9 622 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 IL17FQ96PD4 163 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 FNDC11Q9BVV2 318 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 RMI1Q9H9A7 625 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 TMEM39AQ9NV64 488 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PAQR5Q9NXK6 330 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 NUFIP1Q9UHK0 495 aaKnown RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 SF3B6Q9Y3B4 125 aaKnown RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PRAMEF27A3QJZ7 478 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 K7ESM1 405 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 GUCY1B2O75343 617 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 YES1P07947 543 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 NR2F6P10588 404 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 WEE1P30291 646 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PPM1AP35813 382 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 SYPL1Q16563 259 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PYDC2Q56P42 97 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZNF628Q5EBL2 1059 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 C1orf94Q6P1W5 598 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 C2orf73Q8N5S3 287 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 C1GALT1C1Q96EU7 318 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZBED6CLQ96FA7 236 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 TOX2Q96NM4 488 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 MS4A8Q9BY19 250 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 SERHL2Q9H4I8 314 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 SLA2Q9H6Q3 261 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 RNF121Q9H920 327 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 FGF20Q9NP95 211 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 P2RX2Q9UBL9 471 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 TMEM98Q9Y2Y6 226 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 HCFC2Q9Y5Z7 792 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PLXND1Q9Y4D7 1925 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 TMEM129A0AVI4 362 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 IRGMA1A4Y4 181 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 M0R3H8 397 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PLA2G10O15496 165 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 MOSPD3O75425 235 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 PAPLNO95428 1278 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 EPHX1P07099 455 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 FHP07954 510 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 OR12D1P0DN82 309 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 CSF2RAP15509 400 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 KIR2DL3P43628 341 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 RAB40BQ12829 278 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 NFE2L1Q14494 772 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZNF730Q6ZMV8 503 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 COMTD1Q86VU5 262 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 OR4K5Q8NGD3 323 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 OR2L2Q8NH16 312 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 RAD51AP1Q96B01 352 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 EXOSC8Q96B26 276 aaKnown RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 ZNF514Q96K75 400 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 QRFPRQ96P65 431 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 KATNB1Q9BVA0 655 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 ANKRA2Q9H9E1 313 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 RANGRFQ9HD47 186 aaPredicted RBP11.62□□□□□ -0.55
NPC1-202ENST00000540608 TDP1Q9NUW8 608 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 C5AR2Q9P296 337 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 CARD8Q9Y2G2 431 aa11.62□□□□□ -0.55
NPC1-202ENST00000540608 SLC30A4O14863 429 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 CHRM5P08912 532 aaPredicted RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 ACP2P11117 423 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 KELP23276 732 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 HLA-DMAP28067 261 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GPC1P35052 558 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 SMSP52788 366 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 RPS25P62851 125 aaKnown RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 SNAPC1Q16533 368 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 DUSP6Q16828 381 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.557e-7■■■■□ 19.7
NPC1-202ENST00000540608 CRTC2Q53ET0 693 aaPredicted RBP11.61□□□□□ -0.55
NPC1-202ENST00000540608 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 QSOX2Q6ZRP7 698 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ZNF438Q7Z4V0 828 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ANKRD53Q8N9V6 530 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 MORN4Q8NDC4 146 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 TM9SF4Q92544 642 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 GPA33Q99795 319 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ACAT2Q9BWD1 397 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 RERGLQ9H628 205 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 MAN2C1Q9NTJ4 1040 aa11.61□□□□□ -0.55
NPC1-202ENST00000540608 ACSS1Q9NUB1 689 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms