RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SCGNO76038 276 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 IGF2P01344 180 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 EDN1P05305 212 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 NR2F1P10589 423 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 GRPRP30550 384 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 RORAP35398 523 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 RNF4P78317 190 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 TNK1Q13470 666 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 DUOXA1Q1HG43 343 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 FAM171A1Q5VUB5 890 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 SUSD1Q6UWL2 747 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 APOOLQ6UXV4 268 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 HSDL2Q6YN16 418 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 COPS5Q92905 334 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 NSUN3Q9H649 340 aaKnown RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 SLC6A14Q9UN76 642 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 OR6C68A6NDL8 312 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 FFAR2O15552 330 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 REM1O75628 298 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 HOXC6P09630 235 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 S100A7P31151 101 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 GCGRP47871 477 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 AIMP2Q13155 320 aaKnown RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 CLLU1Q5K131 121 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 GPRC6AQ5T6X5 926 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 CPZQ66K79 652 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 ATRAIDQ6UW56 229 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 TMEM135Q86UB9 458 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 DBF4BQ8NFT6 615 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 SPRYD4Q8WW59 207 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 SGK2Q9HBY8 427 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 GPATCH2Q9NW75 528 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 RCE1Q9Y256 329 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 ASPDHA6ND91 283 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 TCAPO15273 167 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 CREBL2O60519 120 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 RPP14O95059 124 aaKnown RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 PTH2RP49190 550 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 RCAN2Q14206 197 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 GRB14Q14449 540 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 ULK3Q6PHR2 472 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 FBXO16Q8IX29 292 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 AUTS2Q8WXX7 1259 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 ELP4Q96EB1 424 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 SEC22AQ96IW7 307 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 SEPT5Q99719 369 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 VRK1Q99986 396 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 NMNAT1Q9HAN9 279 aaPredicted RBP10.57□□□□□ -0.72
PBX1-212ENST00000540236 NOX3Q9HBY0 568 aa10.57□□□□□ -0.72
PBX1-212ENST00000540236 TNS2Q63HR2 1409 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 PTP4A3O75365 173 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 STX11O75558 287 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RAB5CP51148 216 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 JAG1P78504 1218 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SKP2Q13309 424 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 ZBTB6Q15916 424 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 NDUFAF7Q7L592 441 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 FAM98AQ8NCA5 519 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 C11orf65Q8NCR3 313 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 BRI3BPQ8WY22 251 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 ZNF599Q96NL3 588 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 KCNK12Q9HB15 430 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 TMEM45AQ9NWC5 275 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 GHRLQ9UBU3 117 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RAD1O60671 282 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 POP7O75817 140 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 CLDN9O95484 217 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 PPP3CBP16298 524 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 S100PP25815 95 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 CSF2RBP32927 897 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 MC1RQ01726 317 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 H3F3CQ6NXT2 135 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 COMTD1Q86VU5 262 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 CERS5Q8N5B7 392 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 FCAMRQ8WWV6 532 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 OR7A17O14581 309 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 DDNO94850 711 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 VAMP1P23763 118 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 CPT2P23786 658 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 DLSTP36957 453 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 FABP9Q0Z7S8 132 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 ZNF852Q6ZMS4 543 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 HPSE2Q8WWQ2 592 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 PSMG2Q969U7 264 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SEC14L3Q9UDX4 400 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 GPN3Q9UHW5 284 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 EXO1Q9UQ84 846 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 MED1Q15648 1581 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 LINC00862A6NCI5 91 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 CBY3A6NI87 242 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 GABRR3A8MPY1 467 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 GASTP01350 101 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 PCCBP05166 539 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 ANXA4P09525 319 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 GABRB1P18505 474 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 HSD17B2P37059 387 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms