RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 UBE3DQ7Z6J8 389 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ADGRD2Q7Z7M1 963 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 KIAA1958Q8N8K9 716 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 NACC2Q96BF6 587 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 NEURL3Q96EH8 262 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 SDHCQ99643 169 aaPredicted RBP12.91□□□□□ -0.34
BNIP3-202ENST00000540159 MAPKAP1Q9BPZ7 522 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 AICDAQ9GZX7 198 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 RACGAP1Q9H0H5 632 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 ANKMY1Q9P2S6 941 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
BNIP3-202ENST00000540159 TSPAN11A1L157 253 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 CERS1P27544 350 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ETV5P41161 510 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ETV1P50549 477 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ID2Q02363 134 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 SAXO2Q658L1 398 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 TP53I13Q8NBR0 393 aaPredicted RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 KLHL6Q8WZ60 621 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 CHFRQ96EP1 664 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 C1GALT1C1Q96EU7 318 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 GPR55Q9Y2T6 319 aaPredicted RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ATG4BQ9Y4P1 393 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 IGKV1-8A0A0C4DH67 115 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 TTC36A6NLP5 189 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ASNA1O43681 348 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 CHRM4P08173 479 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 TCEA1P23193 301 aaKnown RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 SOX18P35713 384 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 RFX3P48380 749 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 UBE3AQ05086 875 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 HNRNPA0Q13151 305 aaKnown RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 CACNA1CQ13936 2221 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 PSRC1Q6PGN9 363 aaPredicted RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 ZNF367Q7RTV3 350 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 NUDT13Q86X67 352 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 VRK2Q86Y07 508 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 TMEFF1Q8IYR6 380 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 INSM2Q96T92 566 aaPredicted RBP12.9□□□□□ -0.34
BNIP3-202ENST00000540159 SLC30A2Q9BRI3 323 aa12.9□□□□□ -0.34
BNIP3-202ENST00000540159 E9PQ18 207 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 CCNKO75909 580 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 NCR1O76036 304 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 SDHBP21912 280 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 HOXD12P35452 270 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 SLC15A1P46059 708 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 GSTM5P46439 218 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 SLAMF1Q13291 335 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.35
BNIP3-202ENST00000540159 FAM214AQ32MH5 1076 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 LRIT3Q3SXY7 679 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 TMEM31Q5JXX7 168 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.35
BNIP3-202ENST00000540159 FAM46CQ5VWP2 391 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 NRSN1Q8IZ57 195 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 FBXL6Q8N531 539 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 OR5P2Q8WZ92 322 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 BADQ92934 168 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 ZBED6CLQ96FA7 236 aaPredicted RBP12.9□□□□□ -0.35
BNIP3-202ENST00000540159 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 CA5BQ9Y2D0 317 aa12.9□□□□□ -0.35
BNIP3-202ENST00000540159 HAT1O14929 419 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 SLC31A1O15431 190 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 RB1P06400 928 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 FUT1P19526 365 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 UGT2B10P36537 528 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 RPL3P39023 403 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 OLR1P78380 273 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 ARMC4Q5T2S8 1044 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 SLC30A6Q6NXT4 461 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 CCDC80Q76M96 950 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 GLCCI1Q86VQ1 547 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 OR5K2Q8NHB8 316 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 ZFPM2Q8WW38 1151 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 UBE2E3Q969T4 207 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 TMEM80Q96HE8 168 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 FAM46AQ96IP4 442 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF354BQ96LW1 612 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 TBX5Q99593 518 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 FBXL12Q9NXK8 326 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 SPHK1Q9NYA1 384 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 MKLN1Q9UL63 735 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 WDFY3Q8IZQ1 3526 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 A0A1W2PPV9 198 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 FAM183AA6NL82 134 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 EPPINO95925 133 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms