RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 AKAP10O43572 662 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 PLOD3O60568 738 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 SLITRK5O94991 958 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 LRATO95237 230 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 IFI6P09912 130 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 KITP10721 976 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 G6PDP11413 515 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 PRPS1L1P21108 318 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 RPL3P39023 403 aaKnown RBP20.46■□□□□ 0.87
TRIM65-202ENST00000540128 CLDN8P56748 225 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 PTGR1Q14914 329 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 EBPQ15125 230 aaKnown RBP20.46■□□□□ 0.87
TRIM65-202ENST00000540128 LTB4RQ15722 352 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 TRMT12Q53H54 448 aaKnown RBP20.46■□□□□ 0.87
TRIM65-202ENST00000540128 HSP90B2PQ58FF3 399 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 C6orf163Q5TEZ5 329 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 ZNF468Q5VIY5 522 aaPredicted RBP20.46■□□□□ 0.87
TRIM65-202ENST00000540128 RPUSD3Q6P087 351 aaKnown RBP20.46■□□□□ 0.87
TRIM65-202ENST00000540128 MAVSQ7Z434 540 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 RIMKLAQ8IXN7 391 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 FAM9CQ8IZT9 166 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 ZNF441Q8N8Z8 693 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 OR9A2Q8NGT5 310 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 PPCDCQ96CD2 204 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 AMDHD1Q96NU7 426 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 BRINP2Q9C0B6 783 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 SLCO1B3Q9NPD5 702 aa20.46■□□□□ 0.87
TRIM65-202ENST00000540128 SMG1Q96Q15 3661 aaKnown RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 BCAS2O75934 225 aaPredicted RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 OR2J2O76002 312 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 CBX7O95931 251 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 F10P00742 488 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 DDX5P17844 614 aaKnown RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 FRKP42685 505 aaPredicted RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 CYB561P49447 251 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 SSR4P51571 173 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 DIO3P55073 304 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 DUSP8Q13202 625 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 ZNF385BQ569K4 471 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 C16orf47Q6ZP98 133 aaPredicted RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 SLC29A4Q7RTT9 530 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 ZNF227Q86WZ6 799 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 GPALPP1Q8IXQ4 340 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 SLC15A4Q8N697 577 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 C17orf47Q8NEP4 570 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 TP53INP1Q96A56 240 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 COQ8BQ96D53 544 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 RASL10BQ96S79 203 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 WWTR1Q9GZV5 400 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.45■□□□□ 0.864e-7■■■□□ 15.7
TRIM65-202ENST00000540128 GLIPR2Q9H4G4 154 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 LIN28AQ9H9Z2 209 aaKnown RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 SLAMF7Q9NQ25 335 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 ACSS1Q9NUB1 689 aaPredicted RBP20.45■□□□□ 0.86
TRIM65-202ENST00000540128 SH3BP4Q9P0V3 963 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 CFL2Q9Y281 166 aa20.45■□□□□ 0.86
TRIM65-202ENST00000540128 BSNQ9UPA5 3926 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 WWP2O00308 870 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 PLOD2O00469 737 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 SCAMP2O15127 329 aaKnown RBP20.44■□□□□ 0.86
TRIM65-202ENST00000540128 PRAMEF2O60811 474 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 NEURL1O76050 574 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 NTSP30990 170 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 PTGER1P34995 402 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 HPCAL1P37235 193 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 NCBP2P52298 156 aaKnown RBP eCLIP20.44■□□□□ 0.862e-9■■■□□ 18.4
TRIM65-202ENST00000540128 OR1C1Q15619 314 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 COLEC12Q5KU26 742 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 FHL5Q5TD97 284 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 ANKRD26P1Q6NSI1 321 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 SPATA19Q7Z5L4 167 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 ARFGAP2Q8N6H7 521 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 NATD1Q8N6N6 113 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 HORMAD2Q8N7B1 307 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 C16orf52Q8NHV5 167 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 ACTRT2Q8TDY3 377 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 ADIPOR1Q96A54 375 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 SIGLEC12Q96PQ1 595 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 WDR55Q9H6Y2 383 aaPredicted RBP20.44■□□□□ 0.86
TRIM65-202ENST00000540128 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 MAPRE3Q9UPY8 281 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 USH1CQ9Y6N9 552 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 NBASA2RRP1 2371 aa20.44■□□□□ 0.86
TRIM65-202ENST00000540128 A0A087WV62 115 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 C2orf92A0A1B0GVN3 265 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 PDPK1O15530 556 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 ZNF354AO60765 605 aaPredicted RBP20.43■□□□□ 0.86
TRIM65-202ENST00000540128 TGDSO95455 350 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 NADKO95544 446 aaPredicted RBP20.43■□□□□ 0.86
TRIM65-202ENST00000540128 EPHA3P29320 983 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 MRPS35P82673 323 aaKnown RBP20.43■□□□□ 0.86
TRIM65-202ENST00000540128 SPINK14Q6IE38 97 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 EPGNQ6UW88 154 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 CAMKMTQ7Z624 323 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 TMEM156Q8N614 296 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 SIMC1Q8NDZ2 872 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 KAT2AQ92830 837 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 SCMH1Q96GD3 660 aa20.43■□□□□ 0.86
TRIM65-202ENST00000540128 PRPF18Q99633 342 aaKnown RBP20.43■□□□□ 0.86
TRIM65-202ENST00000540128 EPN3Q9H201 632 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms