RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 EVA1AQ9H8M9 152 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 RDH8Q9NYR8 311 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 EPHA6Q9UF33 1036 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 GPR89AB7ZAQ6 455 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 TSPAN4O14817 238 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 MRPL3P09001 348 aaKnown RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 GPR89BP0CG08 455 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 CSF2RAP15509 400 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF16P17020 682 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 RPS3P23396 243 aaKnown RBP eCLIP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 THBS2P35442 1172 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 NPRL3Q12980 569 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 CHRFAM7AQ494W8 412 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF648Q5T619 568 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SLC18B1Q6NT16 456 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ACBD7Q8N6N7 88 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 OR8J1Q8NGP2 316 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF296Q8WUU4 475 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 TSACCQ96A04 125 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 MUS81Q96NY9 551 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 OR4K3Q96R72 315 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SLC12A9Q9BXP2 914 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 RBCK1Q9BYM8 510 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SLC17A9Q9BYT1 436 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 NANSQ9NR45 359 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZDHHC7Q9NXF8 308 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 NUFIP1Q9UHK0 495 aaKnown RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 CNOT11Q9UKZ1 510 aaKnown RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 BRINP1O60477 761 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 CDC40O60508 579 aaKnown RBP eCLIP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ADORA3P0DMS8 318 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 FUT4P22083 530 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 NUDT1P36639 197 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 MAGEA8P43361 318 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SPHARQ15513 63 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ARSKQ6UWY0 536 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 GPRIN1Q7Z2K8 1008 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 TSPYL5Q86VY4 417 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 BADQ92934 168 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 RHBDF1Q96CC6 855 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 BCL7BQ9BQE9 202 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF700Q9H0M5 742 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 TGM5O43548 720 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 FGF4P08620 206 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 CELP19835 753 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 HOXA11P31270 313 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 GNMTQ14749 295 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ARSJQ5FYB0 599 aaPredicted RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SPATC1Q76KD6 591 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZER1Q7Z7L7 766 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF619Q8N2I2 560 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 TEPSINQ96N21 525 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 BIRC8Q96P09 236 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 F2RL3Q96RI0 385 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 XKR8Q9H6D3 395 aa6.19□□□□□ -1.42
LSAMP-207ENST00000539563 FBRSL1Q9HCM7 1045 aaKnown RBP6.19□□□□□ -1.42
LSAMP-207ENST00000539563 SOCS2O14508 198 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 SEMA4FO95754 770 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 P04436 131 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 UCHL1P09936 223 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF806P0C7X5 589 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 HHEXQ03014 270 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ODF4Q2M2E3 257 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ALG10BQ5I7T1 473 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 KCTD9Q7L273 389 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 KLHDC8AQ8IYD2 350 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 METTL27Q8N6F8 245 aaPredicted RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 TANKQ92844 425 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 PAK1IP1Q9NWT1 392 aaPredicted RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 MAB21L2Q9Y586 359 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 MYO5AQ9Y4I1 1855 aaKnown RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ALS2Q96Q42 1657 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 BORCS7-ASMTA0A0B4J1R7 106 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ACOT7O00154 380 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 SCGB2A1O75556 95 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 GNAO1P09471 354 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 HSD17B1P14061 328 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 HNRNPA2B1P22626 353 aaKnown RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 MLLT10P55197 1068 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 C1orf220Q5T0J3 134 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 PSAPL1Q6NUJ1 521 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 OR2T4Q8NH00 348 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ZDHHC1Q8WTX9 485 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 TRUB1Q8WWH5 349 aaKnown RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 CNN2Q99439 309 aaKnown RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 TAF1P21675 1872 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF860A6NHJ4 632 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 WASH4PA8MWX3 477 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 CD63P08962 238 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 GNRHRP30968 328 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 HK3P52790 923 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 CRYZQ08257 329 aaKnown RBP6.18□□□□□ -1.42
LSAMP-207ENST00000539563 LIPKQ5VXJ0 399 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
LSAMP-207ENST00000539563 PROKR1Q8TCW9 393 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms