RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CD99P14209 185 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 PIK3R1P27986 724 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 PHBP35232 272 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ARL1P40616 181 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 MAGEA12P43365 314 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 CDK9P50750 372 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 CCNG1P51959 295 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 WNT3P56703 355 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ETF1P62495 437 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 SLC7A5Q01650 507 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 TRAF3Q13114 568 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 SNTB1Q13884 538 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 FNDC7Q5VTL7 733 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 HLA-DQA1Q5Y7H0 255 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 FRG2Q64ET8 278 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 C8orf74Q6P047 294 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 C17orf53Q8N3J3 647 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 C17orf47Q8NEP4 570 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 OR4K14Q8NGD5 310 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NANOS1Q8WY41 292 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ATP6V1E2Q96A05 226 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ISL2Q96A47 359 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ADIPOR1Q96A54 375 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NSUN5Q96P11 429 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 FRG2BQ96QU4 278 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 SH3GL2Q99962 352 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NTMT1Q9BV86 223 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 MRPL1Q9BYD6 325 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 PRDM14Q9GZV8 571 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 OR10A5Q9H207 317 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 GSX1Q9H4S2 264 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ZBTB26Q9HCK0 441 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NINJ2Q9NZG7 142 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 ADAM29Q9UKF5 820 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 C15orf41Q9Y2V0 281 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NPFFR2Q9Y5X5 522 aa11.46□□□□□ -0.57
VAMP1-206ENST00000538970 NCKAP5O14513 1909 aa11.46□□□□□ -0.58
VAMP1-206ENST00000538970 AHRRA9YTQ3 701 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 STX16-NPEPL1H3BU86 382 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 SYT5O00445 386 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 DVL2O14641 736 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 STX16O14662 325 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 EPPINO95925 133 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 KLK1P06870 262 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 RBP1P09455 135 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 CPMP14384 443 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 DRD2P14416 443 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 BMP5P22003 454 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 GPX3P22352 226 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 CEACAM8P31997 349 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-206ENST00000538970 PEX19P40855 299 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 CASP3P42574 277 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 KIR2DL3P43628 341 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 ASCL1P50553 236 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 IST1P53990 364 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 NRG3P56975 720 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 GGTA1PQ4G0N0 100 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 C10orf62Q5T681 223 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-206ENST00000538970 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 LACC1Q8IV20 430 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 PRR22Q8IZ63 422 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 TNIP2Q8NFZ5 429 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 OR7G1Q8NGA0 311 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 NINJ1Q92982 152 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 NTNG2Q96CW9 530 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 PHF21BQ96EK2 531 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 TIMP4Q99727 224 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 GPATCH1Q9BRR8 931 aaKnown RBP11.45□□□□□ -0.58
VAMP1-206ENST00000538970 FUT8Q9BYC5 575 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 CRIM1Q9NZV1 1036 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 TMCO1Q9UM00 188 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 DTX4Q9Y2E6 619 aa11.45□□□□□ -0.58
VAMP1-206ENST00000538970 FAM221AA4D161 298 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 RPS17P08708 135 aaKnown RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 PORP16435 677 aaPredicted RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 S1PR1P21453 382 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 NT5EP21589 574 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 ABCD3P28288 659 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 UQCRC1P31930 480 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 TIMP3P35625 211 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 MASP1P48740 699 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 XKP51811 444 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 RPP38P78345 283 aaKnown RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 IFT88Q13099 833 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 FBXL19-AS1Q494R0 122 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 NHSL2Q5HYW2 709 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 CCNYL2Q5T2Q4 361 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 C6orf163Q5TEZ5 329 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 TTC19Q6DKK2 380 aaPredicted RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 SLC48A1Q6P1K1 146 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 PAGE2Q7Z2X7 111 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 COMMD6Q7Z4G1 85 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms