RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 KCNJ2P63252 427 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 EMC4Q5J8M3 183 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 SLC22A10Q63ZE4 541 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 FAM180BQ6P0A1 224 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 PAOXQ6QHF9 649 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 PRR22Q8IZ63 422 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 EID3Q8N140 333 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 FBXW8Q8N3Y1 598 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 SLC15A4Q8N697 577 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 PAQR8Q8TEZ7 354 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 CHTF18Q8WVB6 975 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 TM4SF18Q96CE8 201 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 KCNA7Q96RP8 456 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 SMC6Q96SB8 1091 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 ACPTQ9BZG2 426 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 TP63Q9H3D4 680 aaPredicted RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 C12orf65Q9H3J6 166 aaKnown RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 CHST11Q9NPF2 352 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 PNPLA3Q9NST1 481 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 VPS29Q9UBQ0 182 aa13.78□□□□□ -0.2
RAB40B-202ENST00000538809 CHCHD2Q9Y6H1 151 aaPredicted RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.78□□□□□ -0.2
RAB40B-202ENST00000538809 FBN2P35556 2912 aa13.77□□□□□ -0.2
RAB40B-202ENST00000538809 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 C1orf226A1L170 272 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 LRRC3CA6NJW4 275 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 SMIM23A6NLE4 172 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 ENO1P06733 434 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 MYL2P10916 166 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 PORP16435 677 aaPredicted RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 KRT15P19012 456 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 SOX18P35713 384 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FEN1P39748 380 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FOXA1P55317 472 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FBXW4P57775 412 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 DNAJB13P59910 316 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 TRA2BP62995 288 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 RAE1P78406 368 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 DUSP2Q05923 314 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FUT7Q11130 342 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 LTB4RQ15722 352 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 NNATQ16517 81 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC153Q494R4 210 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 BICRALQ6AI39 1079 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FAM111BQ6SJ93 734 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 DCHS2Q6V1P9 2916 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 FRMD7Q6ZUT3 714 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 TRILQ7L0X0 811 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF615Q8N8J6 731 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 OR2W6PQ8NHA6 318 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 METTL6Q8TCB7 284 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 AENQ8WTP8 325 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 JSRP1Q96MG2 331 aaPredicted RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 BRINP2Q9C0B6 783 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 OR10A5Q9H207 317 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF703Q9H7S9 590 aaPredicted RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 PROK2Q9HC23 129 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 CNOT11Q9UKZ1 510 aaKnown RBP13.77□□□□□ -0.21
RAB40B-202ENST00000538809 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 DTX4Q9Y2E6 619 aa13.77□□□□□ -0.21
RAB40B-202ENST00000538809 GOLGA6L10A6NI86 522 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 GUCY1B2O75343 617 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 ULK1O75385 1050 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 IGHG3P01860 377 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 RFPL3SP0C7P2 107 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 S1PR1P21453 382 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 GPX3P22352 226 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 SERPINB3P29508 390 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
RAB40B-202ENST00000538809 KIR3DL1P43629 444 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 CCT5P48643 541 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 MAN2A2P49641 1150 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 NAA20P61599 178 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 HMGCS1Q01581 520 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 EXOSC7Q15024 291 aaKnown RBP13.76□□□□□ -0.21
RAB40B-202ENST00000538809 NTRK2Q16620 822 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 HYAL4Q2M3T9 481 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 SCIMPQ6UWF3 145 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 DND1Q8IYX4 353 aaKnown RBP13.76□□□□□ -0.21
RAB40B-202ENST00000538809 TAGAPQ8N103 731 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 VWA5B2Q8N398 1253 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 GBP7Q8N8V2 638 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-202ENST00000538809 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 ADCY4Q8NFM4 1077 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 RDH11Q8TC12 318 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 LDAHQ9H6V9 325 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 EXO5Q9H790 373 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 RYDENQ9NUL5 291 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms