RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	DNAJC13	O75165	2243 aa		10.64	□□□□□ -0.71
CTNND1-238	ENST00000534647	TRGV5	A0A0B4J1U4	118 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ATP6AP2	A0A1C7CYW4	349 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	TMEM120B	A0PK00	339 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	HSPB2	A8KAH6	182 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	TRIM49D1	C9J1S8	452 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647		G3V3Y1	287 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	STK16	O75716	305 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ATP6AP2	O75787	350 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	FAM155B	O75949	473 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	NADK	O95544	446 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	CCL3	P10147	92 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	HOXB4	P17483	251 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	KLK2	P20151	261 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	CD22	P20273	847 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ENDOU	P21128	410 aa	Known RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ATP5A1	P25705	553 aa	Known RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	KIR2DL3	P43628	341 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	DNASE1L1	P49184	302 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	POU4F1	Q01851	419 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	DOC2A	Q14183	400 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	HSPB2	Q16082	182 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	FBXL19-AS1	Q494R0	122 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	PAGE2B	Q5JRK9	111 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	NXN	Q6DKJ4	435 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	HIST2H2AA3	Q6FI13	130 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	FBXW8	Q8N3Y1	598 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ACOT4	Q8N9L9	421 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	MGARP	Q8TDB4	240 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	NRGN	Q92686	78 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	MBD6	Q96DN6	1003 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	MAPKAP1	Q9BPZ7	522 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	LDAH	Q9H6V9	325 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	SSU72	Q9NP77	194 aa	Known RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZFP64	Q9NPA5	681 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	MS4A12	Q9NXJ0	267 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	CNIH4	Q9P003	139 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	COPS7A	Q9UBW8	275 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	PTBP2	Q9UKA9	531 aa	Known RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	SPACA6	W5XKT8	324 aa		10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	MAP1A	P78559	2803 aa	Predicted RBP	10.63	□□□□□ -0.71
CTNND1-238	ENST00000534647	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PRRC2A	P48634	2157 aa	Known RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CXorf49	A8MYA2	514 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	AHRR	A9YTQ3	701 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	LDB3	O75112	727 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PIAS1	O75925	651 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	COX7A2	P14406	83 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	EPOR	P19235	508 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	HIST1H1T	P22492	207 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	SERPINB1	P30740	379 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CEACAM8	P31997	349 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	LSP1	P33241	339 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PIGA	P37287	484 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	STT3A	P46977	705 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ARFIP1	P53367	373 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ATP6V0D1	P61421	351 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ASPH	Q12797	758 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF460	Q14592	562 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	DAZAP2	Q15038	168 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PDK4	Q16654	411 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	GRTP1	Q5TC63	336 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ADNP2	Q6IQ32	1131 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF793	Q6ZN11	406 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CHSY3	Q70JA7	882 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CAMKMT	Q7Z624	323 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	GPSM1	Q86YR5	675 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	LAS2	Q8IYD9	372 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	C4orf33	Q8N1A6	199 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PDPR	Q8NCN5	879 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	NEIL3	Q8TAT5	605 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	SLC22A8	Q8TCC7	542 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF473	Q8WTR7	871 aa	Known RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	FAM222B	Q8WU58	562 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	UBE2E3	Q969T4	207 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	SPACA9	Q96E40	222 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	RBM18	Q96H35	190 aa	Known RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ART5	Q96L15	291 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ALPK1	Q96QP1	1244 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CPNE1	Q99829	537 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CNPPD1	Q9BV87	410 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	MS4A8	Q9BY19	250 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	IQCG	Q9H095	443 aa	Known RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	PROK2	Q9HC23	129 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	DLL4	Q9NR61	685 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	SMYD2	Q9NRG4	433 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	3e-6	■■□□□ 13
CTNND1-238	ENST00000534647	ADGRE2	Q9UHX3	823 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	ABCA2	Q9BZC7	2435 aa		10.62	□□□□□ -0.71
CTNND1-238	ENST00000534647	MYOCOS	A0A1B0GUC4	107 aa		10.61	□□□□□ -0.71
CTNND1-238	ENST00000534647		A0A1W2PPM1	405 aa		10.61	□□□□□ -0.71
CTNND1-238	ENST00000534647	NCF1B	A6NI72	391 aa	Predicted RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms