RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 A0A0G2JPF8 293 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 A0A1W2PRG6 482 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 HNRNPCL3B7ZW38 293 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 HNRNPCL4P0DMR1 293 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 MAPK3P27361 379 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 RPL13AP3Q6NVV1 102 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 SAMD12Q8N8I0 201 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 GRPEL2Q8TAA5 225 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF480Q8WV37 535 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 TPSD1Q9BZJ3 242 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 A0A1B0GUL6 1792 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 COL18A1P39060 1754 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 GABRR3A8MPY1 467 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 RNASET2O00584 256 aaKnown RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 E2F3O00716 465 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 AK1P00568 194 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 CASRP41180 1078 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 THAP3Q8WTV1 239 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 FRMD6Q96NE9 622 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 NECTIN4Q96NY8 510 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 FUZQ9BT04 418 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 TCRBV3S1A0A5B6 114 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 THEGLP0DJG4 465 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 LSAMPQ13449 338 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 PIN1Q13526 163 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 CPZQ66K79 652 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 LCTLQ6UWM7 567 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 TMEM173Q86WV6 379 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-205ENST00000533464 SLC44A3Q8N4M1 653 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 SETD6Q8TBK2 473 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 GATA6Q92908 595 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 PEX11GQ96HA9 241 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 CMKLR1Q99788 373 aa16.7■□□□□ 0.26
PHRF1-205ENST00000533464 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 S100A16Q96FQ6 103 aaKnown RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 POLE4Q9NR33 117 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 MAU2Q9Y6X3 613 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PLOD2O00469 737 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PPM1BO75688 479 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 APBB3O95704 486 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PLGP00747 810 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 NR2C1P13056 603 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 HNRNPA2B1P22626 353 aaKnown RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SGSHP51688 502 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 NCS1P62166 190 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PLEKHG7Q6ZR37 379 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 TTLL10Q6ZVT0 673 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 RNF175Q8N4F7 328 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ACBD7Q8N6N7 88 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 DAZLQ92904 295 aaKnown RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 HS6ST2Q96MM7 605 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 RNF121Q9H920 327 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 EXTL2Q9UBQ6 330 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 METTL21EPA6NDL7 271 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 M0R3H8 397 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PLD2O14939 933 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 DDCP20711 480 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 CERS1P27544 350 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 HOXC13P31276 330 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SCGB2B2Q4G0G5 96 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 RNF111Q6ZNA4 994 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SERPINA11Q86U17 422 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 LHPPQ9H008 270 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 C8orf33Q9H7E9 229 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 MTHFD2LQ9H903 347 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 A0A1W2PPK0 400 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SOBPA7XYQ1 873 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 TRAPPC6AO75865 159 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 CYP17A1P05093 508 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SLC6A11P48066 632 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ARHGDIBP52566 201 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PLCXD2Q0VAA5 305 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 NFATC3Q12968 1075 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 PRSS48Q7RTY5 328 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 UBE2Q1Q7Z7E8 422 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF227Q86WZ6 799 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ZFP41Q8N8Y5 198 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 TMEM234Q8WY98 164 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 FAM46AQ96IP4 442 aaKnown RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ZFYVE21Q9BQ24 234 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 APOOQ9BUR5 198 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ACTRT3Q9BYD9 372 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 FBRSQ9HAH7 460 aa16.69■□□□□ 0.26
PHRF1-205ENST00000533464 MAGED1Q9Y5V3 778 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF432O94892 652 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 PGAM2P15259 253 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 GPR143P51810 404 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CDK3Q00526 305 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 NRMQ8IXM6 262 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 FAM86B1Q8N7N1 296 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 GTF2H4Q92759 462 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms