RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 RUNX2Q13950 521 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 RBBP5Q15291 538 aaKnown RBP16.65■□□□□ 0.26
SCN4B-205ENST00000531550 FLYWCH1Q4VC44 716 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 WLSQ5T9L3 541 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 GOLGA7Q7Z5G4 137 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 TMPRSS11BQ86T26 416 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 THOC6Q86W42 341 aaKnown RBP16.65■□□□□ 0.26
SCN4B-205ENST00000531550 KIRREL3Q8IZU9 778 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 TEX9Q8N6V9 391 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 TMEM52Q8NDY8 209 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 SARAFQ96BY9 339 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 NSUN5Q96P11 429 aaKnown RBP16.65■□□□□ 0.26
SCN4B-205ENST00000531550 SORT1Q99523 831 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 SMR3AQ99954 134 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 NTMT1Q9BV86 223 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 CNPPD1Q9BV87 410 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 LDAHQ9H6V9 325 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 ZNF395Q9H8N7 513 aaPredicted RBP16.65■□□□□ 0.26
SCN4B-205ENST00000531550 SLCO1B3Q9NPD5 702 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 GPRC5BQ9NZH0 403 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 CBLCQ9ULV8 474 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 SLC22A14Q9Y267 594 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 ANGPTL3Q9Y5C1 460 aa16.65■□□□□ 0.26
SCN4B-205ENST00000531550 LYPLA1O75608 230 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 HSPA4LO95757 839 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 CHRNGP07510 517 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 ENDOUP21128 410 aaKnown RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 DNASE1L1P49184 302 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 HK2P52789 917 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 PKNOX1P55347 436 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 RAB38P57729 211 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 FOXO1Q12778 655 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 SLC13A2Q13183 592 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 HYAL4Q2M3T9 481 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 HSDL2Q6YN16 418 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 FAM47EQ6ZV65 393 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 Q71RC1 249 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 RPS27LQ71UM5 84 aaKnown RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 HOMEZQ8IX15 550 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 LRRC34Q8IZ02 419 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 FAM47BQ8NA70 645 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 GOLM1Q8NBJ4 401 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 RELL2Q8NC24 303 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 WFDC11Q8NEX6 87 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 TRPC4APQ8TEL6 797 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 FAM222BQ8WU58 562 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 ZNF382Q96SR6 550 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 IPPKQ9H8X2 491 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 SEMA4BQ9NPR2 832 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 ALKBH4Q9NXW9 302 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 TUBA8Q9NY65 449 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-205ENST00000531550 SPRR3Q9UBC9 169 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 DYRK1BQ9Y463 629 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 EML6Q6ZMW3 1958 aa16.64■□□□□ 0.25
SCN4B-205ENST00000531550 A0A0G2JN53 185 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 SYT5O00445 386 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 CLDN4O14493 209 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 OR7A17O14581 309 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 ATE1O95260 518 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 OTCP00480 354 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 RAF1P04049 648 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 FGF4P08620 206 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 GABRA1P14867 456 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 EPORP19235 508 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 STXBP1P61764 594 aaKnown RBP16.63■□□□□ 0.25
SCN4B-205ENST00000531550 SLC10A1Q14973 349 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 ELAVL1Q15717 326 aaKnown RBP16.63■□□□□ 0.25
SCN4B-205ENST00000531550 DEFB113Q30KQ7 82 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 NXPE4Q6UWF7 544 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 CLNKQ7Z7G1 428 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 TMEM132CQ8N3T6 1108 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 GAL3ST3Q96A11 431 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 FAR2Q96K12 515 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
SCN4B-205ENST00000531550 EXO5Q9H790 373 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 NOL11Q9H8H0 719 aaKnown RBP16.63■□□□□ 0.25
SCN4B-205ENST00000531550 SACM1LQ9NTJ5 587 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 KCNE2Q9Y6J6 123 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 ARHGAP21Q5T5U3 1957 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 FBN3Q75N90 2809 aa16.63■□□□□ 0.25
SCN4B-205ENST00000531550 TRGV5A0A0B4J1U4 118 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 PPP6CO00743 305 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 UBFD1O14562 309 aaKnown RBP16.62■□□□□ 0.25
SCN4B-205ENST00000531550 UGDHO60701 494 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 HCN1O60741 890 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 ZNF354AO60765 605 aaPredicted RBP16.62■□□□□ 0.25
SCN4B-205ENST00000531550 TGDSO95455 350 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 ESRRBO95718 433 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 CCL3P10147 92 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 TSPAN8P19075 237 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 CCNG1P51959 295 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 SEC24CP53992 1094 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 E2F2Q14209 437 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 GPRIN3Q6ZVF9 776 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCN4B-205ENST00000531550 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
SCN4B-205ENST00000531550 ATP6V1E2Q96A05 226 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms