RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NR0B1P51843 470 aaKnown RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 HSD11B2P80365 405 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 ZNF829Q3KNS6 432 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 TCTE1Q5JU00 501 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 CES4AQ5XG92 561 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RABL2AQ9UBK7 228 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-227ENST00000530748 RABL2BQ9UNT1 228 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 OR1A2Q9Y585 309 aa8.09□□□□□ -1.11
CTNND1-227ENST00000530748 SMIM30A4D0T7 59 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 UGDHO60701 494 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SEMA4FO95754 770 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CD3GP09693 182 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NDUFV2P19404 249 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NAA10P41227 235 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 MAGEA2P43356 314 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 HHEXQ03014 270 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NR0B2Q15466 257 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SAMD12Q8N8I0 201 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 WDR20Q8TBZ3 569 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 HOXB13Q92826 284 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SLC17A9Q9BYT1 436 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF700Q9H0M5 742 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GSKIPQ9P0R6 139 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 EPHA6Q9UF33 1036 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ADAMTS6Q9UKP5 1117 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CD8B2A6NJW9 211 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 VSTM2BA6NLU5 285 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CD8BP10966 210 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 C1orf61Q13536 156 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GK3PQ14409 553 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NFE2L1Q14494 772 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 LCTLQ6UWM7 567 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZER1Q7Z7L7 766 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 FOXJ1Q92949 421 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 FAM46BQ96A09 425 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ECHDC3Q96DC8 303 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NEDD4LQ96PU5 975 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ABCG2Q9UNQ0 655 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GNRHRP30968 328 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 HMGCLP35914 325 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CTBP2P56545 445 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 DNASE1L3Q13609 305 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 APOFQ13790 326 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 BTBD16Q32M84 506 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SLC18B1Q6NT16 456 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 DPPA4Q7L190 304 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF619Q8N2I2 560 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 NPWQ8N729 165 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 MYRFLQ96LU7 910 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CASD1Q96PB1 797 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 USB1Q9BQ65 265 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF701Q9NV72 531 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 TRAV6A0A075B6T7 132 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 M0R129 80 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 EEF1E1O43324 174 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 LHCGRP22888 699 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 S100A2P29034 98 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SOX2P48431 317 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SLC9A3P48764 834 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 CLCN2P51788 898 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 HNRNPKP61978 463 aaKnown RBP eCLIP8.08□□□□□ -1.126e-14■□□□□ 9.1
CTNND1-227ENST00000530748 OGFRL1Q5TC84 451 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 LEG1Q6P5S2 330 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 TSPAN33Q86UF1 283 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 TMEM173Q86WV6 379 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 LAS2Q8IYD9 372 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 MARVELD2Q8N4S9 558 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZNF709Q8N972 641 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 OR8K5Q8NH50 307 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SORCS1Q8WY21 1168 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 FUBP1Q96AE4 644 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 MSLNLQ96KJ4 702 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 OR10A4Q9H209 315 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 MYNNQ9NPC7 610 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 PRKYO43930 277 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 P04436 131 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ADORA3P0DMS8 318 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GPR4P46093 362 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ARF3P61204 181 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ARF1P84077 181 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 SHC2P98077 582 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 GALNT1Q10472 559 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 KCNAB2Q13303 367 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 ZC3H14Q6PJT7 736 aaKnown RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 KLHDC8AQ8IYD2 350 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 TMIEQ8NEW7 156 aa8.08□□□□□ -1.12
CTNND1-227ENST00000530748 THAP3Q8WTV1 239 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-227ENST00000530748 URM1Q9BTM9 101 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms