RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 DDX18Q9NVP1 670 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 GID8Q9NWU2 228 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ADA2Q9NZK5 511 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 MAT2BQ9NZL9 334 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 ERVK-19Q9WJR5 959 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 MMACHCQ9Y4U1 282 aa9.96□□□□□ -0.82
SOX6-213ENST00000530378 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.96□□□□□ -0.82
SOX6-213ENST00000530378 ACACAQ13085 2346 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 TRBV5-3A0A0A0MS03 114 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 TCRBV16S1A1N1A0A5B0 115 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 BLACEA4D250 179 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 PRKNO60260 465 aaPredicted RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 SEC24DO94855 1032 aaPredicted RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 ONECUT2O95948 504 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 ATP1B1P05026 303 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 SLC35E2P0CK97 266 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 IL10P22301 178 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 SLC6A2P23975 617 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 PTPN4P29074 926 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 SOX18P35713 384 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 TRPC1P48995 793 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CCT3P49368 545 aaKnown RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 OR4D2P58180 307 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 DNASE1L3Q13609 305 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 PRICKLE4Q2TBC4 344 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 COX20Q5RI15 118 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 LRIF1Q5T3J3 769 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 NANOGP8Q6NSW7 305 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 C16orf89Q6UX73 402 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 ANKRD37Q7Z713 158 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 IFNEQ86WN2 208 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 RNF130Q86XS8 419 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 JADE3Q92613 823 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 ROPN1LQ96C74 230 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CCDC124Q96CT7 223 aaKnown RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 ELP4Q96EB1 424 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CDRT15Q96T59 188 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CPPED1Q9BRF8 314 aaPredicted RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 BTBD10Q9BSF8 475 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 THTPAQ9BU02 230 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 THUMPD3Q9BV44 507 aaKnown RBP9.95□□□□□ -0.82
SOX6-213ENST00000530378 SLC26A1Q9H2B4 701 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 WDR54Q9H977 334 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 NANOGQ9H9S0 305 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CXorf21Q9HAI6 301 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 TPT1P8Q9HAU6 139 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 THSD1Q9NS62 852 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 SEMA3GQ9NS98 782 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CMTM6Q9NX76 183 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 IL17BQ9UHF5 180 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 BCAP29Q9UHQ4 241 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 CFAP47Q6ZTR5 3102 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 PCSK5Q92824 1860 aa9.95□□□□□ -0.82
SOX6-213ENST00000530378 NME4O00746 187 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 ERN1O75460 977 aaKnown RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 ALBP02768 609 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 KCNJ2P63252 427 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 MGAT2Q10469 447 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 IL10RAQ13651 578 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 LASP1Q14847 261 aaKnown RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 NNATQ16517 81 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 LACTB2Q53H82 288 aaPredicted RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 C6orf163Q5TEZ5 329 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 TNFAIP8L2Q6P589 184 aaPredicted RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 SAMD14Q8IZD0 417 aaPredicted RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 PGAM4Q8N0Y7 254 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 VWA5B2Q8N398 1253 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 OR5D16Q8NGK9 328 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 OR2Y1Q8NGV0 311 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 PTPMT1Q8WUK0 201 aaPredicted RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 NKD1Q969G9 470 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 TMEM125Q96AQ2 219 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 NXPE2Q96DL1 559 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 C16orf58Q96GQ5 468 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 SLC35G5Q96KT7 338 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 ANKRD27Q96NW4 1050 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 CADM1Q9BY67 442 aaKnown RBP9.94□□□□□ -0.82
SOX6-213ENST00000530378 NRSN2Q9GZP1 204 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 LRMDAQ9H2I8 198 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 TCFL5Q9UL49 500 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 CLCA3PQ9Y6N3 262 aa9.94□□□□□ -0.82
SOX6-213ENST00000530378 CLIC1O00299 241 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 UPK1AO00322 258 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 ATP5HO75947 161 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 NUDT7P0C024 238 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 UQCRC2P22695 453 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 CRATP43155 626 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 ERFP50548 548 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 RPS15P62841 145 aaKnown RBP9.93□□□□□ -0.82
SOX6-213ENST00000530378 ZNF155Q12901 538 aaPredicted RBP9.93□□□□□ -0.82
SOX6-213ENST00000530378 DUSP8Q13202 625 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 SERTAD2Q14140 314 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 RUNDC3AQ59EK9 446 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 C8orf82Q6P1X6 216 aaPredicted RBP9.93□□□□□ -0.82
SOX6-213ENST00000530378 HACD2Q6Y1H2 254 aa9.93□□□□□ -0.82
SOX6-213ENST00000530378 C6orf120Q7Z4R8 191 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms